Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1431 107 2e-18 >seq1431 Length=25833 Score = 107 bits (118), Expect = 2e-18 Identities = 353/544 (65%), Gaps = 21/544 (4%) Strand=Plus/Minus Query 16223 CCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTC 16282 || || |||| ||||||||||||||| ||||| || | || ||||| || || ||| Sbjct 6180 CCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGACCAGGCATGAGCCCGCGCTTC 6121 Query 16283 TTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAA 16342 || | |||||| || || || ||||| || || ||||||||||| ||||| || || Sbjct 6120 TTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAATATACCTTCAACGACCGCGAAT 6061 Query 16343 GCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCG 16402 |||| | ||||| | | | | || || ||||| |||| || Sbjct 6060 GCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCTATCCAGCGGATGGCCCAGTCT 6001 Query 16403 GCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGA 16462 || |||| ||| |||||| || || || || || | || | | || | ||| Sbjct 6000 GCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCGAAAA---GGTGTTGTCGCTGG 5944 Query 16463 A---TATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCT 16519 | || | || || ||||| || || | | || | || |||||||||||||| Sbjct 5943 AGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATAGGTCTCCGAGTGTATGTTCTCC 5884 Query 16520 ATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAAT 16579 || ||| || || || || || |||| | |||| || | ||| || || ||||| Sbjct 5883 ATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCAACTTGGACCTCATTAGAAAAT 5824 Query 16580 CGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCA--ATATGT 16637 ||||| ||||||| ||||| || || ||||| || || || || || | | ||| Sbjct 5823 CGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCTGCGAAGAAAGCAAGGACATGG 5764 Query 16638 GCTTAATGAAATATTTTTCG-------TCAGATGTAAGAATATGCCAATCTTTTAAATCT 16690 | | ||||| | |||| |||| || ||| | |||||| | | || Sbjct 5763 GAT--ATGAAGAAGCGTTCGTCCTCGTTCAGCCGT-AGAGT---CCAATCCATCCAGTCC 5710 Query 16691 TTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTC 16750 ||||| ||||| | |||||| |||||||| ||| ||||| ||| ||||||||| Sbjct 5709 TTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGCCTGTTTGTACATTTTC 5650 Query 16751 CAAA 16754 |||| Sbjct 5649 CAAA 5646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511242219556880