Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1431 203 4e-47 >seq1431 Length=25833 Score = 203 bits (224), Expect = 4e-47 Identities = 387/558 (69%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || |||||| ||| | ||||| |||| || || | |||||| ||||| || || Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || ||||| || || ||||| || ||||| || |||| ||| ||||||||||| ||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGC--GCTG-TCATGT 24311 || ||||| || |||| || || | || | ||||||| | | || | || | | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 24312 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| | || ||||| || ||||| | ||| | |||||| || ||||| || || | Sbjct 6021 ATCCAGCGGATG-GCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTC 5963 Query 24371 AAAGAGATAGttttt--ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 24428 || || | ||| | | | | || || | |||||||| || | | | ||| Sbjct 5962 GAAAAGGT-GTTGTCGCTGGAGGGGT-TCCTTGATGTATGTATCGATAAGCATAGAATAG 5905 Query 24429 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTA 24488 | ||||| || ||||| || || ||||| || ||||| ||||||||| |||| | | Sbjct 5904 GTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCA 5845 Query 24489 ATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 24548 | || || || || |||||||||| | | |||||||| ||||||||||| ||| Sbjct 5844 ACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCT 5785 Query 24549 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGTGTTA---GTTTATT 24604 || || || || | ||||| ||| || | ||||| || || | | || | | Sbjct 5784 GCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCCTCGT-TCAGCCGTAGAGT 5726 Query 24605 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 24664 |||||| | || || || ||||| | ||||||||| ||||||||||| |||| ||| Sbjct 5725 CCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGC 5666 Query 24665 CTTTTTATACATATTCCA 24682 || ||| ||||| ||||| Sbjct 5665 CTGTTTGTACATTTTCCA 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593521708780320