Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1431 235 6e-57 seq3042 145 8e-30 seq9766 141 1e-28 seq9767 127 2e-24 seq13661 100 3e-16 seq13660 100 3e-16 >seq1431 Length=25833 Score = 235 bits (260), Expect = 6e-57 Identities = 399/572 (70%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| || || |||||||| | |||||| ||||||| Sbjct 4473 ATATGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTT 4414 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| ||||||| | ||||||||||| || ||||| |||||| Sbjct 4413 TCGAAGGACCTTCACGACTGGTCTAACAAGTTGAACGACAATGAACGCCACTTCATCTCT 4354 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| ||||| ||| ||||| || |||||||| || |||| || ||| Sbjct 4353 CATGTTCTCGCCTTCTTCGCTGCCTCAGACGGTATTGTCAACGAAAACTTGGTTGAACGT 4294 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || | | || || || | || || || || |||||||||||||| || || ||| Sbjct 4293 TTTTCCAACGAAGTCCAAGCTGCGGAAGCTCGTTGCTTCTACGGCTTCCAAATTATGATG 4234 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--GCGCT-CT-TC 116928 |||||| | ||| |||| ||||| |||||||| || ||| | | | || | Sbjct 4233 GAGAACATCCACAGCGAAACCTATTCCCTTCTCATCGATACCTACATTAAAGATGCTGCC 4174 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | | || || | | || |||| ||||| || || || ||| |||| ||||| Sbjct 4173 GAACGCGA--CTAC--CTCTTCGACGCGATCGAAACCATTCCTTGCATCAAGCGCAAGGC 4118 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 || ||||| || | |||||| ||| | | | |||| | || ||||| || || Sbjct 4117 TGACTGGGCCCTTCATTGGATCTCCGATCAACGGTCTACCTTTGCTGAACGCCTCGTCGC 4058 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 |||||| || || || ||| ||||||| || || ||||| ||||| || ||||| || Sbjct 4057 CTTCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCTTCGCAGCCATCTTCTGGCTGAA 3998 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| || || |||||||| || || || ||| ||| ||||| ||| | | |||||||| Sbjct 3997 GAAGCGTGGACTCATGCCAGGGCTTACCTTCTCCAATGAGCTGATCAGCCGTGACGAGGG 3938 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 |||| ||||||||||| | || |||| Sbjct 3937 CATGCACACGGACTTTGCCTGCCTTCTTTTCA 3906 Score = 203 bits (224), Expect = 3e-47 Identities = 387/565 (68%), Gaps = 15/565 (3%) Strand=Plus/Plus Query 116645 ATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGAC 116704 ||||||||| |||| ||||||| || |||||||| || || | || ||||||||||| Sbjct 5654 ATGTACAAACAGGCACAGGCGTCATTTTGGACCGTGGAAGAAATTGATATGTCCAAGGAC 5713 Query 116705 ACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTG 116761 || || ||| | | ||||||| |||| ||| ||||| || || || Sbjct 5714 TGGATGGATTGGACTCTACGGCTGAACGAGGACGAACGCTTCTTCATATCCCATGTCCTT 5773 Query 116762 GCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG 116821 || || ||||| || ||||| || || || || || |||||||| || || || | Sbjct 5774 GCTTTCTTCGCAGCTTCGGACGGAATAGTTAATGAAAACCTGGTCGAACGATTTTCTAAT 5833 Query 116822 GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTG 116881 ||||| || || || |||| | || || |||||||| || || ||||||||| | Sbjct 5834 GAGGTCCAAGTTGCTGAGGTTAGATGTTTTTACGGCTTCCAAATAATGATGGAGAACATA 5893 Query 116882 CACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTCGGAGGAGAA 116937 |||||||| | ||||| | || ||||| || ||| | | | | || || || Sbjct 5894 CACTCGGAGACCTATTCTATGCTTATCGATACATACATCAAGGAACCCCTCCAGCGACAA 5953 Query 116938 GCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGC 116997 | || ||| |||| |||||||| || || || ||||||| ||||| || ||||| Sbjct 5954 -CACCTTTTCG---ACGCGATCGAGACCATACCTTGTATCAAAGAAAAGGCAGACTGGGC 6009 Query 116998 GCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGC 117057 | |||||||| | | | | | |||| || || || || || || ||||||| Sbjct 6010 CATCCGCTGGATAGAAGATCGGCATTCATCCTTTGGAGAACGGCTCGTCGCATTCGCGGT 6069 Query 117058 CGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGG 117117 ||| || || | ||||| || || ||||| ||||| || ||||||||||| ||||| Sbjct 6070 CGTTGAAGGTATATTCTTCTCTGGATCATTCGCGGCCATCTTCTGGCTCAAGAAGCGCGG 6129 Query 117118 CCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCAT 117175 |||||||| || || || ||||| ||||| || ||| | | || ||||| |||| Sbjct 6130 GCTCATGCCTGGTCTTACCTTTTCA--AACGAACTTATCAGCCGAGATGAGGGCATGCAC 6187 Query 117176 TGCGACTTTGCCTGTTTGCTGTTCA 117200 ||| ||||| || |||| |||| Sbjct 6188 ACCGATTTTGCTTGCCTGCTCTTCA 6212 >seq3042 Length=1648 Score = 145 bits (160), Expect = 8e-30 Identities = 150/194 (77%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || | |||||||| ||||||||| |||| ||||| || | Sbjct 194 AATGCAAATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTC 135 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | | |||| | |||| || |||| ||||| ||||| ||||| | |||| Sbjct 134 CGATACCATCGACAACGTT-AAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCCGACC 76 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | ||||| ||||||| ||| || || ||| |||| |||| ||||| ||| |||||||| Sbjct 75 AACAACGCCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGTCGCACTCTCTCCGACTACA 16 Query 40868 ACATCCAGAAGGAG 40881 |||||||||| ||| Sbjct 15 ACATCCAGAAAGAG 2 >seq9766 Length=663 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||||||||| ||||||||| | || || || | | Sbjct 606 ATGCAGATCTTCGTGAAGACGCTCACGGGCAAGACCATCACCCTTGAGGTTGAGTCGTCG 547 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| ||||| ||||| | || || Sbjct 546 GACACCATCGATAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCA 488 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| ||| ||||| ||||| || |||| ||||| || || ||||| Sbjct 487 GCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGACGCACTCTTTCGGATTACAA 428 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| |||||| |||| || ||||| || Sbjct 427 CATCCAAAAGGAGTCCACCCTTCATCTCGT 398 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| | || ||||| | | Sbjct 378 ATGCAGATCTTCGTCAAGACATTGACTGGCAAGACCATCACGTTGGAAGTCGAGTCTTCG 319 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| ||||| || ||||| || | |||||| Sbjct 318 GACACGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAG 259 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| ||||| ||||| || || | | ||||| ||||||||| Sbjct 258 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTTCTGACTACAAC 199 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| |||| || || || || Sbjct 198 ATTCAGAAGGAGTCCACTCTTCACCTTGT 170 >seq9767 Length=446 Score = 127 bits (140), Expect = 2e-24 Identities = 146/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || | |||||||| ||||||||| | || ||||| || | Sbjct 253 AATGCAAATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTC 312 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | | | |||| |||||| || || | ||||| ||||||||||| | |||| Sbjct 313 CGATACCATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCCGACC 371 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || |||| ||| || || ||| |||| |||| || || ||| ||||||| Sbjct 372 AACAGCGTCTTATCTTCGCTGGAAAGCAGTTGGAAGACGGCCGTACTCTCTCTGACTACA 431 Query 40868 ACATCCAGAAGGAG 40881 |||||||||| ||| Sbjct 432 ACATCCAGAAAGAG 445 >seq13661 Length=1430 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | ||||||||||| || |||| ||| || || || || || |||| |||||| Sbjct 830 ATCCCACCCGACCAGCAACGTCTGATCTTCGCTGGAAAGCAACTCGAAGACGGCCGCACC 771 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| |||||||||||||||||||||| |||| || || || ||| Sbjct 770 CTCAGCGACTACAACATCCAGAAGGAGTCCACTCTCCACCTTGTG 726 >seq13660 Length=1427 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | ||||||||||| || |||| ||| || || || || || |||| |||||| Sbjct 832 ATCCCACCCGACCAGCAACGTCTGATCTTCGCTGGAAAGCAACTCGAAGACGGCCGCACC 773 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| |||||||||||||||||||||| |||| || || || ||| Sbjct 772 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTTGTG 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515045738575840