Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9766 127 2e-24 seq3042 105 6e-18 seq9767 96.9 3e-15 seq13091 91.5 1e-13 >seq9766 Length=663 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| ||||| ||||||||||| | |||||| || |||||||| || || Sbjct 410 GTGGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGTCCGTCTTCGAGCTGCTTGCCG 469 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||||||||| |||||||||||||| || |||||||||||| || || || Sbjct 470 GCGAAGATGAGACGTTGCTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTG 529 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||||| ||| ||||| | ||| | || ||||| || || || Sbjct 530 ACGTTATCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTGAGCGTC 589 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 590 TTCACGAAGATCTGCATG 607 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | || | |||||||||||| || ||| Sbjct 182 GTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTGCCATCCTCGAGCTGCTTGCCA 241 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | |||||||| |||||||| ||||| |||||||| ||| || || Sbjct 242 GCGAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTC 301 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| |||||| || | || | || ||||| |||| || Sbjct 302 ACATTGTCGATCGTGTCCGAAGACTCGACTTCCAACGTGATGGTCTTGCCAGTCAATGTC 361 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 362 TTGACGAAGATCTGCAT 378 >seq3042 Length=1648 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 118546 ACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGT 118605 ||||||| || |||||||| ||| | |||||| || || | ||| ||||| ||| Sbjct 1 ACTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCTTCCAACTGCTTTCCGGCGA 60 Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 ||||||| || || || ||||| || || ||||||||||| ||| || ||||| | Sbjct 61 AGATGAGGCGTTGTTGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTAACGT 120 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||| || | | ||||||||||| ||| | || ||||| |||| || || | Sbjct 121 TGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 180 Query 118726 CAAAAATCTGCAT 118738 | || || ||||| Sbjct 181 CGAAGATTTGCAT 193 >seq9767 Length=446 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 118546 ACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGT 118605 ||||||| || |||||||| || | ||| || || || | ||| ||||||||| Sbjct 446 ACTCTTTCTGGATGTTGTAGTCAGAGAGAGTACGGCCGTCTTCCAACTGCTTTCCAGCGA 387 Query 118606 AGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCT 118665 |||| |||||||| || ||||| || |||||||||||||| || || || || | Sbjct 386 AGATAAGACGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGT 327 Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||| || | | ||||||||| | ||| | || ||||| |||| || || | Sbjct 326 TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 267 Query 118726 CAAAAATCTGCAT 118738 | || || ||||| Sbjct 266 CGAAGATTTGCAT 254 >seq13091 Length=2397 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || || || || || |||||||| ||||||| ||||| ||||| Sbjct 61 CACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCGTCCTC 120 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 |||||| ||||||||| |||| | ||||||||||| ||||| || Sbjct 121 GAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGAAT 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433687991646328