Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq9767 109 6e-19 seq3042 100 3e-16 seq9766 98.7 1e-15 >seq9767 Length=446 Score = 109 bits (120), Expect = 6e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || ||||| |||| ||||| || |||| || | |||||| |||||||| Sbjct 445 CTCTTTCTGGATGTTGTAGTCAGAGAGAGTACGGCCGTCTTCCAACTGCTTTCCAGCGAA 386 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||| ||||||| || | || |||||||||| ||| || |||| ||| Sbjct 385 GATAAGACGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 327 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || ||| || || || || | |||||||| |||||||| | ||||| | Sbjct 326 TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 267 Query 43171 CAAAGATTTGCATT 43184 | |||||||||||| Sbjct 266 CGAAGATTTGCATT 253 >seq3042 Length=1648 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || ||||| || | ||||| || |||| || | |||||| || ||||| Sbjct 2 CTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCTTCCAACTGCTTTCCGGCGAA 61 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| || || ||||||| || | | |||||||||| ||| | || | | | ||| Sbjct 62 GATGAGGCGTTGTTGGTCGGGTGGGATACCCTCCTTGTCC-TGAATCTTGGCCTTAACGT 120 Query 43112 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || ||| || || || |||| |||||||| |||||||| | ||||| | Sbjct 121 TGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 180 Query 43171 CAAAGATTTGCATT 43184 | |||||||||||| Sbjct 181 CGAAGATTTGCATT 194 >seq9766 Length=663 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| |||| || |||| | || || |||||||| |||||||| Sbjct 187 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCGAA 246 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | ||||||||||||| || | || ||||||||| ||| | || | || | Sbjct 247 GATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC-TGAATCTTCGCCTTCACAT 305 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || || | ||||||||| ||||| || | ||||| | Sbjct 306 TGTCGATCGTGTCCGAAGACTCGACTTCCAACGTGATGGTCTTGCCAGTCAATGTCTTGA 365 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 366 CGAAGATCTGCAT 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571625083309520