Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1431 129 5e-25 >seq1431 Length=25833 Score = 129 bits (142), Expect = 5e-25 Identities = 287/431 (67%), Gaps = 0/431 (0%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 ||||||||||| |||| || || || | || || | ||||||||||| |||||| Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || || || || | ||| || || || || ||||| ||||| |||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 ||||||||||| | || ||||| || | || || || | | | || | |||| Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| | ||||| | ||| |||| ||| | ||| ||| |||| || || | Sbjct 6021 ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCG 5962 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || | | | | | | || || || ||||| || || | | ||| | Sbjct 5961 AAAAGGTGTTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATAGGTC 5902 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || || || || |||||||| ||| || || || ||||| |||||| | || | | | Sbjct 5901 TCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCAACT 5842 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || || ||| |||| | ||| | | |||||| ||||||||||| || |||||| Sbjct 5841 TGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCTGCG 5782 Query 16655 AAAAACGCAAG 16665 || || ||||| Sbjct 5781 AAGAAAGCAAG 5771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462356283772400