Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3042 122 7e-23 seq9766 93.3 3e-14 seq9767 82.4 6e-11 >seq3042 Length=1648 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||| ||||| |||||||||||| || |||| |||| |||| || ||||||||||| Sbjct 2 CTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCTTCCAACTGCTTTCCGGCGAA 61 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || ||||||||||| || | ||||||||||||| ||| || |||||| Sbjct 62 GATGAGGCGTTGTTGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTAACGTT 121 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | || ||| ||||| | ||| || ||||||||||||| |||||||| Sbjct 122 GTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 181 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 182 GAAGATTTGCAT 193 >seq9766 Length=663 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||||||||||||||| || | | || || || || Sbjct 175 GTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTGCCATCCTCGAGCTG 234 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| ||||| ||||| ||||||||||| | || ||||||||| ||| || Sbjct 235 CTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTT 294 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| | ||| || |||| || || |||||||| || Sbjct 295 CGCCTTCACATTGTCGATCGTGTCCGAAGACTCGACTTCCAACGTGATGGTCTTGCCAGT 354 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 355 CAATGTCTTGACGAAGATCTGCAT 378 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| |||||| || |||||||| || || ||| |||| || || || Sbjct 404 TGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGTCCGTCTTCGAGCTGC 463 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | || || || |||||||| | |||||||||||| || || Sbjct 464 TTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTC 523 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | ||||| ||| ||||| | ||| || ||||||||||| Sbjct 524 GCCTTGACGTTATCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTG 583 Query 45314 AGAGTCTTCACAAAGATTTGCATG 45337 || |||||||| ||||| |||||| Sbjct 584 AGCGTCTTCACGAAGATCTGCATG 607 >seq9767 Length=446 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||||||||||||| ||| ||| |||| || ||||| ||||||||||| Sbjct 216 TCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAG 157 Query 45206 ATCAACCGCTGTTGGTCGGGAGG 45228 || | |||||||| |||||||| Sbjct 156 ATAAGGCGCTGTTGATCGGGAGG 134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394945513355614