Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq23984 123 6e-24 seq24792 86.0 1e-12 seq22397 86.0 1e-12 >seq23984 Length=1688 Score = 123 bits (136), Expect = 6e-24 Identities = 218/310 (70%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 12699 ATCGACCTCAGCCAGTTGCC-GCCACCACACGCGGTGGAGCAGCTGGACTACGAGCAGAT 12757 ||||| | |||||||| || ||| ||| ||| ||||||||| |||||||| || | Sbjct 830 ATCGATTTAAGCCAGTTACCCGCCCCCA-ACGTGGTGGAGCAACTGGACTATGAAAGCTT 772 Query 12758 ACTCGCCGAGCGCAAGGCCTACGCC-ATCAGCCTCTGGCCGGAGGATCAGCAGGCGGAAA 12816 | | || || || || || |||| || |||| ||| || ||||||| || | Sbjct 771 ATTTGCAGAACGTAAATCC-ACGCTGATTTCGCTCTACCCGCCCGAGCAGCAGGAGGCTA 713 Query 12817 TC-GCCGCCCGCCTCGCCCTGGAGTCCGAACCGCTGACCAAGCTGCTCGAGGAAAACGCA 12875 || ||||| | ||| | ||||||||||| ||| || ||||||| | |||| ||||| Sbjct 712 TCAGCCGCAC-CCTGTCTCTGGAGTCCGAGCCGTTGGTCAAGCTGTTGCAGGAGAACGCC 654 Query 12876 TACCGCGAAATGCTCTGGCGCCAGCGGGTCAACGAGGCGGCTCTCGCCAACATGCTGGCC 12935 ||||||||| | ||| |||||||||||| ||||| || || | |||| ||| ||||| Sbjct 653 TACCGCGAAGTTATCTTGCGCCAGCGGGTTAACGAAGCCGCGCGCGCCGTGATGGTGGCC 594 Query 12936 AGCGCCCAGGGCGCTGACCTCGACCAGCTCGCCGCGAACTACAACGTCAAGCGCCTGGTC 12995 |||| ||| || | |||||||| || || || | ||| |||| ||||| Sbjct 593 TACGCCACCGGCAGCGATTTGGACCAGCTGGCAGCCAATAATGGCGTGCAGCGTCTGGTG 534 Query 12996 ATCCAGCCTG 13005 || | |||| Sbjct 533 CTCAAACCTG 524 >seq24792 Length=536 Score = 86.0 bits (94), Expect = 1e-12 Identities = 244/375 (65%), Gaps = 0/375 (0%) Strand=Plus/Minus Query 1579 CCCCATCAGCTGCGGATAGACCCGCAGGCCGGCGAGCTGGTCGTCGCGGCTGATGTTCTT 1638 |||||||| |||||| || || | | |||| |||| |||||| | |||||| Sbjct 451 CCCCATCATCTGCGGCGGCACGCGATGCACACTGAGCAGGTCATCGCGGGTCGCGTTCTT 392 Query 1639 GATTGAGCCGAACTCGTCCTTGGCCGCCACCTCGCTGACCGGAATCAGTTGGATCCCCTC 1698 ||| ||| || ||||||| ||||| ||||| | ||| || | || ||| | || Sbjct 391 GATGTTAAAGAAATCATCCTTGGTTGCCACTTCGCTAAGCGGGATAATTTTAATCGCGTC 332 Query 1699 CTTCTTCCCGTTCGGCGCGTAGACGAACAGGTTGCGGAAATTGCCAGGCCCCTTCGCGGT 1758 || ||||||||||| | || | ||| | ||||| || ||||||| | Sbjct 331 GGGTTTGCCGTTCGGCGCATGATAAAAAATGTTTCTAAAATTCCCGTCGCCCTTCGATTT 272 Query 1759 CTTCAGCGCCGTGCGCAGCGCGTCGATGTCTTCCTCATTCTGTGCGGCGTCGGTCATGTA 1818 ||| | ||||| || || || || | ||||| || | |||||| | || Sbjct 271 GCTCATCATGTCGCGCAATGCCGAAATATCCTCTTTGTTCTGCGCAGGGTCGGTTACATA 212 Query 1819 GAGGATGAAGCCGGCGTGGCTGCCGTTGTTGTAGTACTTACGCCGGAACAGCGTGGCCGA 1878 | | |||| ||||| |||||| | | | ||||| || ||| ||||||| || || Sbjct 211 CATCACATAGCCCGCGTGCGCGCCGTTCTCGAAATACTTGCGGCGGTACAGCGTCGCTGA 152 Query 1879 CTCGTTCAGCAGGGCGCTCTGTAGGGCGCAGAACCACTCCGGCACTCCGTAGATTTCCTG 1938 || || ||| ||||| | || |||| || |||| |||| || || | ||||| Sbjct 151 TTCATTGAGCCACGCGCTGTTTAATGCGCTGAGGTACTCTGGCAGGCCATACAGCTCCTG 92 Query 1939 ATTGATGTCGGCCTC 1953 ||| ||||| | ||| Sbjct 91 ATTAATGTCCGGCTC 77 >seq22397 Length=674 Score = 86.0 bits (94), Expect = 1e-12 Identities = 165/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 12699 ATCGACCTCAGCCAGTTGCC-GCCACCACACGCGGTGGAGCAGCTGGACTACGAGCAGAT 12757 |||||||| |||||||| || ||| | || || || ||| | | || ||||| | | Sbjct 427 ATCGACCTGAGCCAGTTACCCGCCCCGAC-CGTTGTCGAGGTGATTGATTACGAAGTGCT 485 Query 12758 ACTCGCCGAGCGCAAGGCCTACGCCATCAGC-CTCTGGCCGGAGGATCAGCAGGCGGAAA 12816 | | |||||||| || || |||| | | |||| ||| || |||||||| | | Sbjct 486 ATTGGCCGAGCGTAAAGCG-ACGCTGGTATCGCTCTACCCGCCAGAGCAGCAGGCCGCTA 544 Query 12817 TCGCCGCCCGCCTCGCCCTGGAGTCCGAACCGCTGACCAAGCTGCTCGAGGAAAACGCAT 12876 | | | ||| | ||||||||||| || | ||||||| | |||||||||| | Sbjct 545 TATCTCGCAACCTGACGCTGGAGTCCGAGCCCATCGTCAAGCTGTTGCAGGAAAACGCCT 604 Query 12877 ACCGCGAAATGCTCTGGCGCCAGCGGGTCAACGAGGCGGCTCTCGCCAACATGCTGGC 12934 ||||||| || | | ||||||||| || |||| |||||| | | | ||||||||| Sbjct 605 ACCGCGAGGTGATTTTGCGCCAGCGCGTTAACGCGGCGGCGCAGGGCGTCATGCTGGC 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113698023047336