Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1431 145 7e-30 >seq1431 Length=25833 Score = 145 bits (160), Expect = 7e-30 Identities = 295/434 (68%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || |||||||| || | ||||||||||| || ||||||||||||||||| || | Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 || ||||| | || || || || | ||| || || || || ||||| || || |||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT--TTTTGTTCG 14049 || || ||||| | || || || | | ||||||||||| |||| | | ||| Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTC- 6023 Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109 |||||| | ||||| || | |||| ||| ||| || || || || || || | Sbjct 6022 -TATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGT 5964 Query 14110 TAAATAAATATTCCTTCTCTTTAG----TACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 || | | || || || || | |||| ||||||||||| ||||| | | Sbjct 5963 CGAAAAGGTGTT--GTCGCTGGAGGGGTTCCTTG--ATGTATGTATCGATAAGCATAGAA 5908 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || | || ||||||||||| ||||| ||| || || || ||||| |||||| | || Sbjct 5907 TAGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCA 5848 Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 | ||| || || |||||| |||| ||| |||||||||||||| || || | Sbjct 5847 GCAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAA 5788 Query 14286 GCTGCAAAAAATGC 14299 ||||| || || || Sbjct 5787 GCTGCGAAGAAAGC 5774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479566487575600