Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1431 174 2e-38 >seq1431 Length=25833 Score = 174 bits (192), Expect = 2e-38 Identities = 299/432 (69%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || |||||||| || | ||||||||||| || ||||||||||||||||| || | Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 || ||||| | || || || || | ||| || || || ||||||||||| || |||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 || || ||||| | || || || | || ||||||||||| |||| | | | | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899 ||||| | ||||| || | |||| ||| ||| || || || ||||| || | | Sbjct 6021 ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCG 5962 Query 13900 AATAAATGTTCCTTCTCTTTAG----TACTTGAAATGTATGTATCAATAAGTAAGCTATA 13955 || | |||| || || || | |||| ||||||||||| ||||| | ||| Sbjct 5961 AAAAGGTGTT--GTCGCTGGAGGGGTTCCTTG--ATGTATGTATCGATAAGCATAGAATA 5906 Query 13956 CATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGA 14015 | || ||||||||||| || || ||| || || || |||||||||||| | || | Sbjct 5905 GGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGC 5846 Query 14016 CCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGC 14075 ||| ||||| |||||| ||| ||| |||||||||||| || || || ||| Sbjct 5845 AACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGC 5786 Query 14076 TGCAAAAAATGC 14087 ||| || || || Sbjct 5785 TGCGAAGAAAGC 5774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478427671115760