Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1431 181 1e-40 >seq1431 Length=25833 Score = 181 bits (200), Expect = 1e-40 Identities = 380/558 (68%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || |||||| ||||| |||||||||| || || | |||||| ||||| || || Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || || ||||| || ||||| || || | ||| ||||||||||| ||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA---CTGTCATGT 42241 || ||||| || |||| || || | || | |||||| | | | | || | | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 ||||| | || ||||| || ||||| | ||| | |||||| || || || || || | Sbjct 6021 ATCCAGCGGATG-GCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTC 5963 Query 42301 AAAGAGATAGttttt--ttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATAC 42358 || || | ||| | | | | || || | ||||||||||| | | | ||| Sbjct 5962 GAAAAGGT-GTTGTCGCTGGAGGGGT-TCCTTGATGTATGTATCGATAAGCATAGAATAG 5905 Query 42359 ATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTA 42418 | || || || ||||| || || || || || ||||| |||||||| |||| | | Sbjct 5904 GTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCA 5845 Query 42419 ACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCT 42478 || || || || || |||||||||| | | ||||| || ||||||||||| ||| Sbjct 5844 ACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCT 5785 Query 42479 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATT 42534 || || || || | ||||| ||| || | ||||||| ||| | | | | Sbjct 5784 GCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCC-TCGTTCAGCCGTAGAGT 5726 Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594 |||||| | || || || ||||| | |||||| || ||||||||||| || | ||| Sbjct 5725 CCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGC 5666 Query 42595 CTTTTTATACATATTCCA 42612 || ||| ||||| ||||| Sbjct 5665 CTGTTTGTACATTTTCCA 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670913244209840