Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1431 181 2e-40 >seq1431 Length=25833 Score = 181 bits (200), Expect = 2e-40 Identities = 383/563 (68%), Gaps = 20/563 (4%) Strand=Plus/Plus Query 125020 TTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGT 125079 ||||| ||||||||||| |||| ||||| || |||||||| || ||||| | ||| ||| Sbjct 5646 TTTGGAAAATGTACAAACAGGCACAGGCGTCATTTTGGACCGTGGAAGAAATTGATATGT 5705 Query 125080 CCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT----ATA 125135 |||||||| | |||||| |||| | | ||||| | ||| | || ||| Sbjct 5706 CCAAGGACTGGATGGATTGG---ACTC-TACGGCTGAACGAGGACGAACGCTTCTTCATA 5761 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195 || || | | || ||||| || | || || ||||| || || || || ||| | | Sbjct 5762 TCCCATGTCCTTGCTTTCTTCGCAGCTTCGGACGGAATAGTTAATGAAAACCTGGTCGAA 5821 Query 125196 CGATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 ||||| ||| | ||| | ||| || | ||||| || |||||||| |||||||| | Sbjct 5822 CGATTTTCTAATGAGGT--CCAAGTTGCTGAGGTTAGATGTTTTTACGGCTTCCAAATAA 5879 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC 125313 |||| |||||| | |||||||| | || |||| || || || | ||||| || | Sbjct 5880 TGATGGAGAACATACACTCGGAGACCTATTCTATGCTTATCGATACATACATCAAGGAAC 5939 Query 125314 CGC---AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370 | | | || ||||| || || |||| ||||| || | || | ||| ||| Sbjct 5940 CCCTCCAGCGACAACAC---CTTTTCGACGCGATCGAGACCATACCTTGTATCAAAGAAA 5996 Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGA-CGACAAGTCTTCGTACGCCGACAGACTG 125429 |||| | |||| || || ||||| || || || || || || | | || | || Sbjct 5997 AGGCAGACTGGGCCATCCGCTGGATAGAAGATCGGCAT-TCATCCTTTGGAGAACGGCTC 6055 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || |||||||| | ||| || || || ||||| || || || ||||||||||| ||| Sbjct 6056 GTCGCATTCGCGGTCGTTGAAGGTATATTCTTCTCTGGATCATTCGCGGCCATCTTCTGG 6115 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 |||||||||||||| |||||||| || || || ||||| |||| ||||| Sbjct 6116 CTCAAGAAGCGCGGGCTCATGCCTGGTCTTACCTTTTCAAACGAACTTATCAGCCGAGAT 6175 Query 125550 GAGGGCCTACACTGTGACTTTGC 125572 |||||| | ||| || ||||| Sbjct 6176 GAGGGCATGCACACCGATTTTGC 6198 Score = 138 bits (152), Expect = 2e-27 Identities = 374/562 (67%), Gaps = 14/562 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | || || || ||||| | || ||| | || || Sbjct 4473 ATATGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTT 4414 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || |||||||| |||| ||| | |||| || | ||| || | || || || Sbjct 4413 TCGAAGGACCTTCACGACTGGTCTAACAAGTTGAACGACAATGAACGCCACTTCATCTCT 4354 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 || || | |||||||| || | ||| || || || |||||||| || || |||| ||| Sbjct 4353 CATGTTCTCGCCTTCTTCGCTGCCTCAGACGGTATTGTCAACGAAAACTTGGTTGA-ACG 4295 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGT-GCTTTTACGGATTCCAAATCAT 125254 || || | || | ||| | | || | |||| |||| ||||| |||||||| || Sbjct 4294 TTTTTCCAACGAAGT--CCAAGCTGCGGAAGC-TCGTTGCTTCTACGGCTTCCAAATTAT 4238 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC 125314 ||| |||||| | ||| |||| || || || || || | |||||| ||| | Sbjct 4237 GATGGAGAACATCCACAGCGAAACCTATTCCCTTCTCATCGATACCTACATTAAAGATGC 4178 Query 125315 -GC--AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 || |||| | || ||||| |||| ||||| || | || | || || Sbjct 4177 TGCCGAACGCGACTAC---CTCTTCGACGCGATCGAAACCATTCCTTGCATCAAGCGCAA 4121 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| ||| |||||| || | |||| | | || || | || || Sbjct 4120 GGCTGACTGGGCCCTTCATTGGATCTCCGATCAACGGTCTACCTTTGCTGAACGCCTCGT 4061 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || |||||||| || || ||||||||||| || || || || |||||||| ||||| Sbjct 4060 CGCCTTCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCTTCGCAGCCATCTTCTGGCT 4001 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 |||||||| ||||||||||| || || || | || ||| | || || ||||| Sbjct 4000 GAAGAAGCGTGGACTCATGCCAGGGCTTACCTTCTCCAATGAGCTGATCAGCCGTGACGA 3941 Query 125552 GGGCCTACACTGTGACTTTGCC 125573 |||| | ||| ||||||||| Sbjct 3940 GGGCATGCACACGGACTTTGCC 3919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740809703893840