Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1431 125 6e-24 >seq1431 Length=25833 Score = 125 bits (138), Expect = 6e-24 Identities = 289/435 (66%), Gaps = 8/435 (2%) Strand=Plus/Minus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || |||||||| ||||| || ||||||| || || || ||||||||||| || ||| Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| ||||| || || || | ||| || || || || || || || || || ||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT 13330 || |||||||| | || || || | | || ||| ||| | | || | ||| Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTA 13390 ||||| ||||||||| ||| |||| ||| | || || | || || |||| Sbjct 6021 ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGT-- 5964 Query 13391 AATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGC----TATA 13446 || | | || || | | | | |||| |||| |||||| ||| Sbjct 5963 --CGAAAAGGTGTTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATA 5906 Query 13447 CATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGA 13506 | || || || || || |||||| ||||||||| || |||||||||||| |||| | Sbjct 5905 GGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGC 5846 Query 13507 TACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGC 13566 || || || || |||||| ||| | | |||||| |||||||| ||||| ||| Sbjct 5845 AACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGC 5786 Query 13567 AGCaaaaaaaGCAAG 13581 || || |||||||| Sbjct 5785 TGCGAAGAAAGCAAG 5771 Score = 96.9 bits (106), Expect = 3e-15 Identities = 357/557 (64%), Gaps = 3/557 (1%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || ||||| || ||||| || || || | || || ||||| || || || || || Sbjct 3917 CAGGCAAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTAAGC 3976 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| || || || || || | ||| || || || || || || || || || || Sbjct 3977 CCTGGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAGAAG 4036 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT 13330 || ||||| ||||| || || || | | | |||| || | ||| || | Sbjct 4037 ATGCCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAGGTAGACCGTTGATCGGAG 4096 Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTA 13390 ||||| | |||||||| || || | || | ||| || |||| || |||| Sbjct 4097 ATCCAATGAAGGGCCCAGTCAGCCTTGCGCTTGATGCAAGGAATGGTTTCGATCGCGTCG 4156 Query 13391 AATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATT 13450 || | || | ||| | ||| ||| || ||||| || | | | ||| || Sbjct 4157 AAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGTATCGATGAGAAGGGAATAGGTT 4216 Query 13451 TCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACC 13510 || || || || |||||| |||||||| || || || || | ||| || | | Sbjct 4217 TCGCTGTGGATGTTCTCCATCATAATTTGGAAGCCGTAGAAGCAACGAGCTTCCGCAGCT 4276 Query 13511 TGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCa 13570 || |||||| | |||| | ||| | ||||||||||| || || ||||| ||||| Sbjct 4277 TGGACTTCGTTGGAAAAACGTTCAACCAAGTTTTCGTTGACAATACCGTCTGAGGCAGCG 4336 Query 13571 aaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACT--TTA-ACCAA 13627 || || || || | || || || | ||| || || ||||| ||| |||| Sbjct 4337 AAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTCGTTCAACTTGTTAGACCAG 4396 Query 13628 TCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTC 13687 || ||| || || || | || | ||||||| | ||||| |||||||| | |||||| Sbjct 4397 TCGTGAAGGTCCTTCGAAAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCGGCCTTC 4456 Query 13688 TTATACATCATCCATAT 13704 || ||||| |||||| Sbjct 4457 TTGTACATTTGCCATAT 4473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430840926525468