Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq21315 655 0.0 seq25544 91.5 4e-14 >seq21315 Length=730 Score = 655 bits (726), Expect = 0.0 Identities = 436/483 (90%), Gaps = 6/483 (1%) Strand=Plus/Minus Query 33221 GGCTTACCACGGGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGCTGTCCGGC 33280 || ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 730 GGTTTACCGCGAGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGTCTGCTGTCCGGC 671 Query 33281 GAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGG 33340 ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 670 GAGAAGGACATTGCCCAGCCCACTGGCTTTCTTGCGAACAGGTCGAGAACAACGGCGAGG 611 Query 33341 TACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGC 33400 ||||||||||| || || ||||||||||||||||| |||||||||| || || ||| Sbjct 610 TACGCCCAGCGTTTGCCTGTCCAGATATAGGTCACGTCACCGCACC-----TGGTTAGGC 556 Query 33401 TCGGTCACGGCGAACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCA 33460 || || ||||||||||| | ||||| | || ||||||||||| || |||||||| || Sbjct 555 TCCGTTACGGCGAACTGTCGCTCAAGATGATTTGGGATAGCAACGTGCTCATGACCGCCT 496 Query 33461 CGTTTATACCGGTGAGTCGGCTGCTGACAGCTGACCAGCCCCAGC-TCTTTCATGAGCCT 33519 || ||||||||||||| ||| |||||||| |||| |||||||||| |||||||||||||| Sbjct 495 CGCTTATACCGGTGAGCCGGTTGCTGACAACTGAACAGCCCCAGCCTCTTTCATGAGCCT 436 Query 33520 GCCAGCAAGCCAGCGTCCCATCTGGTAGCCTCTCCGGGTTGCCATTGTGGCGATGCTTCT 33579 ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 435 GCCAGCAAGCCAGCGCCCCATCTGATAGCCTCTCTGGGTTGCCATTGTGGCGATGCTTCT 376 Query 33580 TGCTCCGGCCGAACCGTGGCTGATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGC 33639 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||| Sbjct 375 TGCTCCGGCCGAACCATGGCTGATGCCATGCAGCTCAAGTACCTGACTGCGTAATATAGC 316 Query 33640 CCGTCTGCCGTCTGGTTTTTCAGGACGGTTTTTCCAGTATCTGTAGCTGCTGCGATGAAC 33699 ||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||| Sbjct 315 CCGTCTGCCGTCTGGCTTTTCAGGATGGTTTTTCCAGTATTTGTAGCTACTGCGATGAAC 256 Query 33700 CCC 33702 ||| Sbjct 255 CCC 253 Score = 172 bits (190), Expect = 1e-38 Identities = 115/128 (90%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33793 GTAGCCTTTTTTAATATTTCATTCTCCATTTCAATGCGTTGTAGCTTTTTCCTGAGCTCA 33852 || ||||||||||||||||| || ||||||||||||||||||||||||||| | |||||| Sbjct 128 GTGGCCTTTTTTAATATTTCGTTTTCCATTTCAATGCGTTGTAGCTTTTTCTTTAGCTCA 69 Query 33853 CGGATTTCAATTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGACGCTCA 33912 || ||||| ||||||||||| || || |||||||||||||| |||||||||| ||||||| Sbjct 68 CGTATTTCGATTTGTTCCGGCGTTATCGGGGAGGCTTTTGGCGTTTTGCCCTAACGCTCA 9 Query 33913 TCACGCAG 33920 |||| ||| Sbjct 8 TCACACAG 1 >seq25544 Length=603 Score = 91.5 bits (100), Expect = 4e-14 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 21658 GCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCGCAGATATTCGCTGGCAATTTCTG 21717 |||| | |||||| | ||||||| ||| ||||| |||| ||||| | ||| ||||| | Sbjct 193 GCAACTGGCCTTCGATGTAAACCTGAGAACCTTTATGCAGGTATTCTCCGGCGATTTCAG 134 Query 21718 CCAGTTTCCCGCTCATTACCACGCGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTT 21777 | || || || || ||||| |||||||| || || |||| || | || || | || Sbjct 133 CAAGCTTGCCAAACAACACCACTCGGTGCCATTCAGTACGCTCTTTCTCTTCGCCTGATT 74 Query 21778 GCTTATCACGCCATTGTTCTGACGTAGCAACTGTAAGGTT 21817 | ||||||||||| ||| ||||| || | || || ||| Sbjct 73 GTTTATCACGCCAGGATTCAGACGTGGCCAATGAAATGTT 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124776078694540