Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq157 127 3e-25 seq2976 107 3e-19 seq8088 95.1 2e-15 seq8087 91.5 2e-14 >seq157 Length=18794 Score = 127 bits (140), Expect = 3e-25 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| || || |||||||| || || |||||||| ||||||||| |||| Sbjct 4972 AGGTATCACCAAGCCCGCCATTCGTCGTCTTGCCCGCCGTGGTGGTGTCAAGCGTATCTC 5031 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| ||| |||| ||||| | |||| ||| | ||||| |||||| ||| ||| |||| Sbjct 5032 TGGGTTGATCTACGAAGAAACCCGTGGTGTCCTCAAGATTTTCCTCGAGAACGTCATCCG 5091 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| || || ||| || |||||||| || || Sbjct 5092 TGACTCTGTCACCTACACTGAGCACGCCAAGCG 5124 >seq2976 Length=4430 Score = 107 bits (118), Expect = 3e-19 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| ||||| |||||||| || || || ||||| ||||||||| | || Sbjct 78 AGGTATCACCAAGCCCGCTATTCGTCGTCTTGCCCGCCGAGGTGGTGTCAAGCGTATTTC 137 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 ||| | |||| ||||||| |||| |||| ||||||| |||||| ||| ||| Sbjct 138 TGGTCTTATCTACGAAGAGACCCGTGGTGTTCTGAAGATTTTCCTCGAGAACGT 191 >seq8088 Length=1508 Score = 95.1 bits (104), Expect = 2e-15 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| ||||| |||||||| || || ||||| || ||||||||| | || Sbjct 1070 AGGCATCACAAAGCCCGCTATTCGTCGTCTTGCCCGCCGTGGAGGTGTCAAGCGTATTTC 1129 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| | |||| ||||||| ||| | |||| | ||||||||||| Sbjct 1130 TGGTCTTATCTACGAAGAGACTCGCGGTGTTCTCAAGATCTTCCT 1174 >seq8087 Length=2219 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| ||||| |||||||| || || ||||| || ||||||||| | || Sbjct 439 AGGCATCACAAAGCCCGCTATTCGTCGTCTTGCCCGCCGTGGAGGTGTCAAGCGTATTTC 380 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 || | |||| ||||||| ||| | |||| | ||||||||||| Sbjct 379 GGGTCTTATCTACGAAGAGACTCGCGGTGTTCTCAAGATCTTCCT 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79050574055262