Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1431 102 9e-17 >seq1431 Length=25833 Score = 102 bits (112), Expect = 9e-17 Identities = 269/415 (65%), Gaps = 10/415 (2%) Strand=Plus/Minus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || |||||||| |||| || ||||| | || || | ||| || ||||| || | | Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595 || ||||| | || | ||| || | ||| || || | ||| |||| ||| || ||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAAT 21655 || || |||||| | || ||||| || | ||||| || | | || | ||| | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 21656 ATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTT 21715 ||||| ||||| | |||||||||||| |||||| || || || || || | Sbjct 6021 ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCG 5962 Query 21716 AAAAGATGAtttttttCATCTACATCGGTT-----ATGNNNNNNNNNNNNNNNNNACTAT 21770 ||||| || || || || | |||| ||| | || Sbjct 5961 AAAAGGTG----TTGTC-GCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGAAT 5907 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 | | || || ||||| || || ||| ||| || || |||||||||||||| |||| | Sbjct 5906 AGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAG 5847 Query 21831 AACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 | ||| ||||| | ||||||||| ||| ||||||||| |||||||| || Sbjct 5846 CAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTC 5792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531721722298160