Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1431 199 5e-46 >seq1431 Length=25833 Score = 199 bits (220), Expect = 5e-46 Identities = 386/558 (69%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || |||||| ||||| ||||| |||| || || |||||||| ||||| || || Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| || || ||||| || ||||| || |||| |||||||||||||| ||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GCTG-TCATGT 33480 || ||||| || | || || || | || | |||||| | | || | || | | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 33481 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||| | || ||||| || ||||| | ||| | |||||| || || || || || | Sbjct 6021 ATCCAGCGGATG-GCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTC 5963 Query 33540 AAAGAGATAGttttt--ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 33597 || || | ||| | | | | || || | || |||||||| | | | ||| Sbjct 5962 GAAAAGGT-GTTGTCGCTGGAGGGGT-TCCTTGATGTATGTATCGATAAGCATAGAATAG 5905 Query 33598 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 33657 | ||||| || ||||| || || || || || ||||| ||||||||| |||| | | Sbjct 5904 GTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCA 5845 Query 33658 ATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCT 33717 | || || || || |||||||||| ||| |||||||| ||||||||||| ||| Sbjct 5844 ACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCT 5785 Query 33718 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGTGTTA---GTTTATT 33773 || || || || | ||||| ||| || | ||||| || || | | || | | Sbjct 5784 GCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCCTCGT-TCAGCCGTAGAGT 5726 Query 33774 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33833 |||||| | || || || ||||| | ||||||||| ||||||||||| |||| ||| Sbjct 5725 CCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGC 5666 Query 33834 CTTTTTATACATGTTCCA 33851 || ||| ||||| ||||| Sbjct 5665 CTGTTTGTACATTTTCCA 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622737469251440