Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq371 140 2e-28 seq3162 100 2e-16 seq3042 86.0 4e-12 >seq371 Length=10399 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 8475 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 8416 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 8415 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8381 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 6471 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 6412 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 6411 GCCAATATTTAGCTTTA 6395 >seq3162 Length=1495 Score = 100 bits (110), Expect = 2e-16 Identities = 198/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||| ||||| | | | | |||| | || || ||||| || || || Sbjct 604 TTCTACCGTTACCGCATGCCCCTCTTGACCACCAAAATTGAAGGCAAGGGGAATGGCATC 545 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 ||||| |||||| |||||| | || |||||| || ||| | |||||| | || ||| Sbjct 544 AAAACTGTCATTCCAAACATGTCGGATGTCGCTCGCGCTCTCAGTCGCCCTCCGACTTAC 485 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | || || | |||||||||||| || ||||||||||| || || | || ||||| Sbjct 484 ACTACCAAGTTTTTCGGGTGCGAGCTAGGCGCTCAGACTTCCTTCGACGAAAAGAACGAT 425 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 || | || || ||||| | || ||| ||| || | || | || || | |||| Sbjct 424 CGTTATATTGTAAACGGTGCCCACAACGCTGATCGTCTTCGCGAGCTTCTCGATGTCTTT 365 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTAT 6493 || ||||| || |||| || ||| | ||||| ||||| || || || Sbjct 364 ATCGATAAGTTCGTTTTGTGCAAGGCTTGCAAGAACCCCGAGACGGAACTCAT 312 >seq3042 Length=1648 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 ||| || || || ||||| || || | | || |||| || || || |||||||| || Sbjct 2 CTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCTTCCAACTGCTTTCCGGCGAA 61 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 || ||||||||||| |||| |||| || || |||||| ||| || ||| || || Sbjct 62 GATGAGGCGTTGTTGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTAACGTT 121 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || ||||| || || || | || || || || ||||||||||| ||||| Sbjct 122 GTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAAGGTCTTCAC 181 Query 38306 GAATATCTGCAT 38317 ||| || ||||| Sbjct 182 GAAGATTTGCAT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334837250860154