Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1431 194 2e-44 >seq1431 Length=25833 Score = 194 bits (214), Expect = 2e-44 Identities = 385/558 (69%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || |||||| ||| | ||||| |||| || || | |||||| ||||| || || Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| || || ||||| || ||||| || |||| ||| ||||||||||| ||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GCTG-TCATGT 32837 || ||||| || |||| || || | || | |||||| | | || | || | | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 32838 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | || ||||| || ||||| | ||| | |||||| || ||||| || || | Sbjct 6021 ATCCAGCGGATG-GCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTC 5963 Query 32897 AAAGAGATAGttttt--ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATAC 32954 || || | ||| | | | | || || | |||||||| || | | | ||| Sbjct 5962 GAAAAGGT-GTTGTCGCTGGAGGGGT-TCCTTGATGTATGTATCGATAAGCATAGAATAG 5905 Query 32955 ATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTA 33014 | ||||| || ||||| || || ||||| || ||||| || |||||| |||| | | Sbjct 5904 GTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCA 5845 Query 33015 ATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCT 33074 | || || || || |||||||||| | | |||||||| ||||||||||| ||| Sbjct 5844 ACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCT 5785 Query 33075 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT-CTGGTGTTA---GTTTATT 33130 || || || || | ||||| ||| || | ||||| || || | | || | | Sbjct 5784 GCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCCTCGT-TCAGCCGTAGAGT 5726 Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190 |||||| | || || || ||||| | ||||||||| ||||||||||| |||| ||| Sbjct 5725 CCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGC 5666 Query 33191 CTTTTTATACATATTCCA 33208 || ||| ||||| ||||| Sbjct 5665 CTGTTTGTACATTTTCCA 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633418671946400