Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1431 172 6e-38 >seq1431 Length=25833 Score = 172 bits (190), Expect = 6e-38 Identities = 382/563 (68%), Gaps = 19/563 (3%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAATGTT 93148 ||| ||||| ||||| || | || || ||||| ||||| | || || || || Sbjct 6202 GCAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATA--AGTTCGTTTGAAAAGGTA 6145 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 | ||| || | || || || ||||||||||| || || | || || ||||| || Sbjct 6144 AGACCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAG 6085 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA--ATT--TGCGGAATT 93264 ||||||||||| ||| | || ||||| || | ||||| |||| || ||| || | Sbjct 6084 AATATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCT 6025 Query 93265 ACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGAT 93324 || ||||| | ||||| || || |||| || |||||||||| || ||||| Sbjct 6024 TCT----ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGAT 5969 Query 93325 AGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGA 93384 |||| || |||| | ||||| | | || |||||||||||||| | || ||| Sbjct 5968 CGCGTCGAAAAGGTGTTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGA 5909 Query 93385 ATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTC 93444 ||| | || || || | |||||||| |||||||| ||||| ||||||||| | || Sbjct 5908 ATAGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTC 5849 Query 93445 CGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 | | || || || | |||||||| || || || |||||||| ||||| || || || Sbjct 5848 AGCAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGA 5789 Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTAT-AAAATGTTTCTCATCATCTTTAAGC---T 93560 ||||| || ||||| | | ||| ||| || | | | || || || || ||| Sbjct 5788 AGCTGCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGT-TCGTCCTCGTTCAGCCGTA 5730 Query 93561 TATCCCAATCGGATAGA-TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619 | |||||| || | || || || | ||| | |||||| || |||||||| || || Sbjct 5729 GAGTCCAATC-CATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCC 5671 Query 93620 TCTGCTTTTTTGTACATATCCCA 93642 | ||| | ||||||||| | ||| Sbjct 5670 TGTGCCTGTTTGTACATTTTCCA 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556673318890160