Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3042 123 2e-23 seq9767 120 3e-22 seq9766 114 1e-20 seq20961 87.8 2e-12 >seq3042 Length=1648 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || || || || |||| || || || || || || Sbjct 193 ATGCAAATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 134 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | | || || ||||| |||||||||||||| |||||||| ||| Sbjct 133 GATACCATCGACAACGTTAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCCGACCAA 74 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || || ||||| || ||||| || || ||||| ||||||| |||||| Sbjct 73 CAACGCCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGTCGCACTCTCTCCGACTACAAC 14 Query 22399 ATTCAAAAAGA 22409 || || ||||| Sbjct 13 ATCCAGAAAGA 3 >seq9767 Length=446 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || || || || |||| ||||| || || || || Sbjct 254 ATGCAAATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCC 313 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| || |||||||| ||| Sbjct 314 GATACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAA 373 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||||| || || ||| || |||| || |||||| Sbjct 374 CAGCGTCTTATCTTCGCTGGAAAGCAGTTGGAAGACGGCCGTACTCTCTCTGACTACAAC 433 Query 22399 ATTCAAAAAGA 22409 || || ||||| Sbjct 434 ATCCAGAAAGA 444 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 ||||| ||||||||||| || ||||| || ||||| || || | ||||| ||||||| Sbjct 131 ATTCCTCCCGATCAACAGCGCCTTATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACC 190 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGA 22443 | ||||| ||||||||||| || ||||| ||| | ||| | || | || | ||||| Sbjct 191 CTGTCCGACTACAACATTCAGAAGGAATCTACCCTTCATCTTGTCCTCCGCCTTCGCGGT 250 Query 22444 GG 22445 || Sbjct 251 GG 252 >seq9766 Length=663 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || || | | Sbjct 606 ATGCAGATCTTCGTGAAGACGCTCACGGGCAAGACCATCACCCTTGAGGTTGAGTCGTCG 547 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || ||||||||||||||||| || |||||||| Sbjct 546 GACACCATCGATAACGTCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCAG 487 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| ||| | || || ||||| | || ||||||||| Sbjct 486 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGACGCACTCTTTCGGATTACAAC 427 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || |||||| | ||| | || | || | || |||||| Sbjct 426 ATCCAAAAGGAGTCCACCCTTCATCTCGTCCTTCGTCTTCGTGGAGGT 379 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| | ||||| || | | Sbjct 378 ATGCAGATCTTCGTCAAGACATTGACTGGCAAGACCATCACGTTGGAAGTCGAGTCTTCG 319 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || ||||| |||||||| || ||||| ||||| || Sbjct 318 GACACGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAG 259 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||| | |||||| | | ||| | || || |||||| Sbjct 258 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTTCTGACTACAAC 199 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 198 ATTCAGAAGGAGTCCAC 182 >seq20961 Length=332 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| |||||||| || ||||| ||||| || || || | || ||||| ||||| Sbjct 294 AAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCTTGATCTTTGCTGGCAAG 235 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| | | ||| | || |||||||||||||| || || ||||| Sbjct 234 CAGCTCGAGGATGGCAGGACCCTTTCTGATTACAACATTCAGAAGGAGTCCAC 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419590220873710