Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4001 118 2e-21 seq1431 91.5 3e-13 >seq4001 Length=8000 Score = 118 bits (130), Expect = 2e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 ||| | || || |||||||||||||||||||| |||||| |||| ||||| || | Sbjct 5584 GGTGCCCTTTCCGGTGGTTGGAAGATGAAGCTCGCCCTCGCTCGTGCCATGCTTTTCAAG 5643 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 |||||| |||| || || |||||||| || ||||| ||||| |||| | || ||| Sbjct 5644 GCCGATATCCTCCTCCTCGATGAGCCTACTAACCATTTGGACGTTGTCAACATCGCTTGG 5703 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 | | | |||||| ||||| || |||| | | ||| |||| ||||| |||||||| Sbjct 5704 TTGGAGAACTACCTCACCAGCCTCAAGACCTGTACCTCCATCATCGTCTCCCACGACTCC 5763 Query 279879 GGCTTCCT 279886 ||||||| Sbjct 5764 AGCTTCCT 5771 >seq1431 Length=25833 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 || ||||| || || |||||||| || | |||||||| || ||||| | |||||| Sbjct 3582 TAGTCAGAGACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGAAGCGAGATCATGTCCATG 3641 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 |||||||||||||| || | ||||| |||| | || || || |||| || || Sbjct 3642 AAGTCGAAGGGGTTCGTAGAGTTGTAGACCTTGTCGTTACCGAGAGCAACGAGGAGACGA 3701 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || |||||||| | ||||| | ||| || | | ||||||||||| Sbjct 3702 TCGGCGACAAACTCAATGTACTGGCACATGAGGTTACCATTCATGCCAAT 3751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027482101871494