Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1431 176 9e-39 seq804 129 1e-24 seq9456 125 1e-23 >seq1431 Length=25833 Score = 176 bits (194), Expect = 9e-39 Identities = 380/563 (67%), Gaps = 13/563 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||| |||| ||| || ||||||| || || ||||| || |||||||| Sbjct 5654 ATGTACAAACAGGCACAGGCGTCATTTTGGACCGTGGAAGAAATTGATATGTCCAAGGAC 5713 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAAAAACATACT 42424 || || | ||| || | |||| | ||||| || ||| | | | || Sbjct 5714 T-GGATGGATTGGACTCTACGGCTGAACGAGGACGAACGCTTCTTCATATCCCATGTCCT 5772 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCC--ACCAGGTTCATG 42482 || |||||||| || || ||||| ||||| ||||| ||||||| | || | ||| Sbjct 5773 TGCTTTCTTCGCAGCTTCGGACGGAATAGTTAATGAAAACCTGGTCGAACGATTTTCT-- 5830 Query 42483 AAAGAGGTGCAGTACTT--TGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 || ||||| || | || ||||| | || || ||||||||||| ||| || |||| Sbjct 5831 AATGAGGTCCA--AGTTGCTGAGGTTAGATGTTTTTACGGCTTCCAAATAATGATGGAGA 5888 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 || | ||||| ||| || | | || || | || |||||| ||| ||| || ||| Sbjct 5889 ACATACACTCGGAGACCTATTCTATGCTTATCGATACATACATCAAGGAACCCCTCCAGC 5948 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | | || ||| | || || ||||| || || || ||||| | ||||| ||||||| Sbjct 5949 GACAACACCTTTTCGACGCGATCGAGACCATACCTTGTATCAAAGAAAAGGCAGACTGGG 6008 Query 42661 CGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | || |||||| || || | || | || || || |||| || || || | | Sbjct 6009 CCATCCGCTGGATAGAAGATCGGCATTCATCCTTTGGAGAACGGCTCGTCGCATTCGCGG 6068 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGG 42780 ||| || || || |||||||| || | ||||| ||||||||||||||||| || | Sbjct 6069 TCGTTGAAGGTATATTCTTCTCTGGATCATTCGCGGCCATCTTCTGGCTCAAGAAGCGCG 6128 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | ||||| || || ||||| || |||||||| |||||| | || ||||| |||| | Sbjct 6129 GGCTCATGCCTGGTCTTACCTTTTCAAACGAACTTATCAGCCGAGATGAGGGCATGCACA 6188 Query 42841 GGGACTTTGCCTGCCTCCTGTTC 42863 || ||||| ||||| || ||| Sbjct 6189 CCGATTTTGCTTGCCTGCTCTTC 6211 Score = 174 bits (192), Expect = 3e-38 Identities = 505/780 (65%), Gaps = 73/780 (9%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||| ||||| ||||| || ||||| || ||| ||| | || Sbjct 4347 CTCGCCTTCTTCGCTGCCTCAGACGGTATTGTCAACGAAAACTTGGTTGAACGTTTTTCC 4288 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || || || || || ||||||||||||||||| || || |||||| Sbjct 4287 AACGAAGTCCAAGCTGCGGAAGCTCGTTGCTTCTACGGCTTCCAAATTATGATGGAGAAC 4228 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||| || || || || || | || ||||| ||| | | ||| || Sbjct 4227 ATCCACAGCGAAACCTATTCCCTTCTCATCGATACCTACATTAAAGATGCTGCCGAACGC 4168 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || || ||| | || || || || || || ||||||||| ||||| |||||||| Sbjct 4167 GACTACCTCTTCGACGCGATCGAAACCATTCCTTGCATCAAGCGCAAGGCTGACTGGGCC 4108 Query 42663 CTCAACTGGATCGAGAGTCC---CGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 || | |||||| ||| | ||| | || || | || | || || ||||| Sbjct 4107 CTTCATTGGATC-----TCCGATCAACGGTCTACCTTTGCTGAACGCCTCGTCGCCTTCG 4053 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| || || |||||||||||||| || ||||||| ||||||||||||| ||| || Sbjct 4052 CCGCAGTGGAAGGCATCTTCTTCTCTGGATCCTTCGCAGCCATCTTCTGGCTGAAGAAGC 3993 Query 42778 A-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 || || ||||| || || |||||||| || || || |||||| | |||||||| || Sbjct 3992 GTGGACTC-ATGCCAGGGCTTACCTTCTCCAATGAGCTGATCAGCCGTGACGAGGGCATG 3934 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT---CAGGCACAAGCCCTCGAAG 42893 || | ||||||||||||||| || ||| |||||||| | | | | || | | | Sbjct 3933 CACACGGACTTTGCCTGCCTTCTTTTC---AGCCACCTTCGCCGTCGCCCGCACCC---G 3880 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC---- 42949 || ||| | |||||||||||||| || | ||| || | |||||| | || Sbjct 3879 GACGTTGTCAAGCGAATCATCACGGAGGCTGTCGCGATTGAACAAGAGTTCTTGACTGGT 3820 Query 42950 --GC--------AGT------------------------------------CGCTGCCCG 42963 || ||| | || || | Sbjct 3819 GAGCAACCCCCTAGTGCTGTCTTCTGCCGCTACTAACCAGGCCTTTAGATGCACTTCCTG 3760 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 | ||||| | |||||||| ||||||||||| ||||||| ||| |||||||| | Sbjct 3759 TCTCCCTCATTGGCATGAATGGTAACCTCATGTGCCAGTACATTGAGTTTGTCGCCGATC 3700 Query 43024 ATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTT 43082 |||||| || | | ||| | | |||||||| | || |||||||||||| Sbjct 3699 GTCTCCTCGTTGC-TCTCGGTAACGACAAGGTCTACAACTCTACGAACCCCTTCGACTTC 3641 Query 43083 ATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTAC 43142 ||||| | |||||| | |||||||||| ||||| ||||||||||||||| | |||||| Sbjct 3640 ATGGACATGATCTCGCTTCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCTGACTAC 3581 >seq804 Length=7234 Score = 129 bits (142), Expect = 1e-24 Identities = 185/257 (72%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCG 244393 || ||||| |||||||| ||| | || ||| ||| |||| || ||||||| | ||| Sbjct 6089 GGACTGCCTTCGTAGGTTTCGTATGTTCCATCGGTCTGTGCCATCTCACAGCTCGCTTCG 6148 Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 ||||| | | ||||||||||||||| ||| | ||||| || | || |||| || Sbjct 6149 AGGGCACCATGGTAGATGGTCTCGAAAATCTGCACGTTCAATTCTCTAGC--GGCCGGAG 6206 Query 244454 -GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 || ||| |||||| || | ||||||| | ||||| || || ||||| ||||| || | Sbjct 6207 AGTCGAAAGGGATGTGCAGCGCCATGAAGGCATCGGCAAGACCTTGCACACCGATACCAA 6266 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 |||| | ||| ||| |||| || || ||||| ||| ||||| ||||| |||||| Sbjct 6267 TGGGACGGTGACGCATGTTCGATCGGCGAGCTTCAGGCGTAGGGTAGTAGTTGACGTCGA 6326 Query 244572 TCACCTTGTTGAGGTTG 244588 | | |||||||||| Sbjct 6327 TGATACGGTTGAGGTTG 6343 >seq9456 Length=2706 Score = 125 bits (138), Expect = 1e-23 Identities = 184/257 (72%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCG 244393 |||||||| |||||||| ||| | || || ||| |||| || ||||||| | ||| Sbjct 1564 GGGCTGCCTTCGTAGGTTTCGTAAGTGCCTTCCGCCTGCGCCATCTCACAGCTCGCTTCG 1623 Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 ||||| | | |||||||||||||| ||| | ||||| || | || |||| || Sbjct 1624 AGGGCACCATGATAGATGGTCTCGAAAATCTGCACGTTCAATTCTCTAGC--GGCCGGAG 1681 Query 244454 -GT-GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 || ||| |||||| || | ||||||| | ||||| || || ||||| ||||| || | Sbjct 1682 AGTCGAAAGGGATGTGCAGCGCCATGAAGGCATCGGCAAGACCTTGCACACCGATACCAA 1741 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 |||| | ||| ||| |||| || || ||||| ||| ||||| ||||| |||||| Sbjct 1742 TGGGACGGTGACGCATGTTCGATCGGCGAGCTTCAGGCGTAGGGTAGTAGTTGACGTCGA 1801 Query 244572 TCACCTTGTTGAGGTTG 244588 | | |||||||||| Sbjct 1802 TGATACGGTTGAGGTTG 1818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944021264599840