Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq25232 129 1e-25 seq24792 120 7e-23 seq25519 95.1 3e-15 seq26286 87.8 4e-13 >seq25232 Length=1112 Score = 129 bits (142), Expect = 1e-25 Identities = 189/262 (72%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 724 AGTTCGATGTTTTCGGCCA-CGCAGCCGCAGCCGAAGTCTTCGACCACGTAGGCGTCGTT 782 || ||||||||||| || ||| || ||||||| |||| ||||||||| | | | || Sbjct 267 AGCTCGATGTTTTCAATCATCGCCGC-GCAGCCGTAGTCCTCGACCACGAAATCCACTTT 209 Query 783 CGACGATTCGTAGTTCTCGATGCGGTCGCGTTCCGGC-ACTTCCTTCAGCGTGCGCCGGC 841 | ||| |||||||| ||||||||||| || | ||| || || | | ||| ||| Sbjct 208 CAGCGACTCGTAGTTTTCGATGCGGTCACGG-CTGGCGACCTCATCGATATGGCGGCGGT 150 Query 842 GCGCGCCTTCCTGGTAGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCGCT 901 ||| | ||| | |||||| ||||| || ||| |||| | || |||| | Sbjct 149 GCGAGTTGTCCATGATGTAGATAGACAGGTTATCCAGACGGGTGATTAACAACGCGTTGT 90 Query 902 TCGGGAAGAACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGGCTCACGATCA 961 |||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||| | Sbjct 89 CAGGGAAGTACGGCACGCGCACGGCGGGCAGGTTGCCGATGCGCTTCTGGCTGACGATAA 30 Query 962 GATCGGCCGCGAGCCGCTCGGT 983 || | || ||| |||||| Sbjct 29 CGTCACCGGCCAGCTTCTCGGT 8 >seq24792 Length=536 Score = 120 bits (132), Expect = 7e-23 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 4986 GCCGGACATCAATCAGGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGC 5045 ||||||||| ||||||||| | ||||||||||| ||||| || ||| | | || || Sbjct 79 GCCGGACATTAATCAGGAGCTGTATGGCCTGCCAGAGTACCTCAGCGCATTAAACAGCGC 138 Query 5046 CTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGC 5105 ||||| || ||||| ||||||||| ||| |||||||||| |||||||||| ||||| Sbjct 139 GTGGCTCAATGAATCAGCGACGCTGTACCGCCGCAAGTATTTCGAGAACGGCGCGCACGC 198 Query 5106 CGGCTTCATCCTGTACATGACCGACGCCGCGCAGAA 5141 |||| | |||| | |||||| | |||||||| Sbjct 199 GGGCTATGTGATGTATGTAACCGACCCTGCGCAGAA 234 Score = 96.9 bits (106), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 5265 CGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGACGATCTGCT 5324 ||| || || | ||||| || ||||| ||||||||||||| ||| ||||| || ||||| Sbjct 358 CGAAGTGGCAACCAAGGATGATTTCTTTAACATCAAGAACGCGACCCGCGATGACCTGCT 417 Query 5325 CGCCGCGCACCGCGTGCCGCCGCAGTTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTT 5384 | | ||| ||||||||||||||| || | || || | ||||||||| | ||||| || Sbjct 418 CAGTGTGCATCGCGTGCCGCCGCAGATGATGGGGATTATCCCGAGCAATACCGGCGGATT 477 Query 5385 CGG 5387 || Sbjct 478 TGG 480 >seq25519 Length=629 Score = 95.1 bits (104), Expect = 3e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 23358 TCGGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTCATAA 23417 ||||||||||| |||||||| ||||| ||| ||||| ||||||||||||||||| ||| Sbjct 239 TCGGTGATGCGTTGGCGCAGGGTCAGATCTTCCAGAGGTGGAACCGGCGTGTAGTCGTAA 180 Query 23418 TCGATGTACGCCTTGCC 23434 ||||||||| |||||| Sbjct 179 TCGATGTACAACTTGCC 163 >seq26286 Length=482 Score = 87.8 bits (96), Expect = 4e-13 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 2154 TTCGGTGCCGAGGCTCGCCGGGTCGTCGGTCGCCGCGAGCCCAACGAGATACGCCTCGCC 2213 |||||| ||||||||||| ||||| || || | || ||||| || ||||| || | ||| Sbjct 74 TTCGGTACCGAGGCTCGCAGGGTCATCAGTGACGGCCAGCCCGACCAGATAGGCTTTGCC 133 Query 2214 GATGTCGGCGAAGTCGGGGTTGATCTCGATCGACGTGAAGAGCTTCTGGCGCTTCTTCGA 2273 | ||| ||||| | ||| || || || || ||| | | |||||| | | ||| || Sbjct 134 GGTGTTAGCGAAATTCGGGCGAATTTCCATGGAGGTGTAAATCTTCTGAC-CGGCTTTGA 192 Query 2274 -CAGCGCGACGAGCTCGTCGGTCGGATCGA-TCTGCGCATACAGCGCCATCTTCCCTTTC 2331 || ||| | |||||||| ||||| || |||| || |||| |||| ||| || ||| Sbjct 193 CCATGGCGGCCAGCTCGTCAGTCGGGGTGATTCTG-GCGTACAACGCCCACTTGCCATTC 251 Query 2332 AGCG 2335 |||| Sbjct 252 AGCG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114213058265124