Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_009236.1 Length=36690 Score E Sequences producing significant alignments: (Bits) Value seq25232 125 2e-24 seq24792 120 7e-23 seq25519 98.7 2e-16 seq26286 96.9 8e-16 >seq25232 Length=1112 Score = 125 bits (138), Expect = 2e-24 Identities = 188/262 (72%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 779 AGTTCGATGTTTTCGGCCA-CGCAGCCGCAACCGAAGTCTTCGACCACGTAGGCGTCGTT 837 || ||||||||||| || ||| || ||| ||| |||| ||||||||| | | | || Sbjct 267 AGCTCGATGTTTTCAATCATCGCCGC-GCAGCCGTAGTCCTCGACCACGAAATCCACTTT 209 Query 838 CGACGATTCGTAGTTCTCGATGCGGTCGCGTTCCGGC-ACTTCCTTCAGCGTGCGCCGGC 896 | ||| |||||||| ||||||||||| || | ||| || || | | ||| ||| Sbjct 208 CAGCGACTCGTAGTTTTCGATGCGGTCACGG-CTGGCGACCTCATCGATATGGCGGCGGT 150 Query 897 GCGCGCCTTCCTGGTAGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCGCT 956 ||| | ||| | |||||| ||||| || ||| |||| | || |||| | Sbjct 149 GCGAGTTGTCCATGATGTAGATAGACAGGTTATCCAGACGGGTGATTAACAACGCGTTGT 90 Query 957 TCGGGAAGAACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGGCTCACGATCA 1016 |||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||| | Sbjct 89 CAGGGAAGTACGGCACGCGCACGGCGGGCAGGTTGCCGATGCGCTTCTGGCTGACGATAA 30 Query 1017 GATCGGCCGCGAGCCGCTCGGT 1038 || | || ||| |||||| Sbjct 29 CGTCACCGGCCAGCTTCTCGGT 8 >seq24792 Length=536 Score = 120 bits (132), Expect = 7e-23 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 5041 GCCGGACATCAATCAGGAGGTCTATGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGC 5100 ||||||||| ||||||||| | ||||||||||| ||||| || ||| | | || || Sbjct 79 GCCGGACATTAATCAGGAGCTGTATGGCCTGCCAGAGTACCTCAGCGCATTAAACAGCGC 138 Query 5101 CTGGCTGAACGAATCGTCGACGCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGC 5160 ||||| || ||||| ||||||||| ||| |||||||||| |||||||||| ||||| Sbjct 139 GTGGCTCAATGAATCAGCGACGCTGTACCGCCGCAAGTATTTCGAGAACGGCGCGCACGC 198 Query 5161 CGGCTTCATCCTGTACATGACCGACGCCGCGCAGAA 5196 |||| | |||| | |||||| | |||||||| Sbjct 199 GGGCTATGTGATGTATGTAACCGACCCTGCGCAGAA 234 Score = 102 bits (112), Expect = 2e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 5320 CGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCT 5379 ||| || || | ||||| || ||||| ||||||||||||| ||| |||||||||||||| Sbjct 358 CGAAGTGGCAACCAAGGATGATTTCTTTAACATCAAGAACGCGACCCGCGATGACCTGCT 417 Query 5380 CGCCGCACACCGCGTGCCGCCGCAGTTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTT 5439 | | || ||||||||||||||| || | || || | ||||||||| | ||||| || Sbjct 418 CAGTGTGCATCGCGTGCCGCCGCAGATGATGGGGATTATCCCGAGCAATACCGGCGGATT 477 Query 5440 CGG-CACGCCGGATACCGCTGCACGCGTGTTCGGGCGCAACGAAATCAGGCCGCTACAGG 5498 || ||| || | || ||| ||||| | ||| ||||| | |||||||||| Sbjct 478 TGGTGACG-TTGAGAAAGCGGCAAAGGTGTTTGTGCGTAACGAGCTGGTACCGCTACAGG 536 >seq25519 Length=629 Score = 98.7 bits (108), Expect = 2e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 24362 TCGGTGATGCGCTGGCGCAGCACCAGATTTTCGAGAGGCGGAACCGGCGTGTAGTCGTAA 24421 ||||||||||| |||||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct 239 TCGGTGATGCGTTGGCGCAGGGTCAGATCTTCCAGAGGTGGAACCGGCGTGTAGTCGTAA 180 Query 24422 TCGATGTACGCCTTGCC 24438 ||||||||| |||||| Sbjct 179 TCGATGTACAACTTGCC 163 >seq26286 Length=482 Score = 96.9 bits (106), Expect = 8e-16 Identities = 135/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 2209 TTCGGTGCCGAGGCTCGCCGGGTCGTCGGTCGCCGCGAGCCCGACGAGATACGCCTCGCC 2268 |||||| ||||||||||| ||||| || || | || |||||||| ||||| || | ||| Sbjct 74 TTCGGTACCGAGGCTCGCAGGGTCATCAGTGACGGCCAGCCCGACCAGATAGGCTTTGCC 133 Query 2269 GATGTCGGCGAAGTCGGGGTTGATTTCGATCGACGTGAAGAGCTTCTGGCGCTTCTTCGA 2328 | ||| ||||| | ||| ||||| || || ||| | | |||||| | | ||| || Sbjct 134 GGTGTTAGCGAAATTCGGGCGAATTTCCATGGAGGTGTAAATCTTCTGAC-CGGCTTTGA 192 Query 2329 -CAGCGCGACGAGCTCGTCGGTCGGATCGA-TCTGCGCATACAGCGCCATCTTCCCTTTC 2386 || ||| | |||||||| ||||| || |||| || |||| |||| ||| || ||| Sbjct 193 CCATGGCGGCCAGCTCGTCAGTCGGGGTGATTCTG-GCGTACAACGCCCACTTGCCATTC 251 Query 2387 AGCG 2390 |||| Sbjct 252 AGCG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117248886971216