Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1431 114 3e-20 seq4877 84.2 5e-11 >seq1431 Length=25833 Score = 114 bits (126), Expect = 3e-20 Identities = 129/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || ||||||||||| | | |||||| | |||||||| || || || ||||| || | Sbjct 3754 CTCATTGGCATGAATGGTAACCTCATGTGCCAGTACATTGAGTTTGTCGCCGATCGTCTC 3695 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || || ||| | || || || |||||||| | ||||||||| | ||| ||||| Sbjct 3694 CTCGTTGCTCTCGGTAACGACAAGGTCTACAACTCTACGAACCCCTTCGACTTCATGGAC 3635 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 | || |||||||| || || || ||||||||||| ||||| ||| ||| || Sbjct 3634 ATGATCTCGCTTCAGGGCAAGACGAACTTCTTCGAGAAGCGCGTCTCTGACTA 3582 >seq4877 Length=18368 Score = 84.2 bits (92), Expect = 5e-11 Identities = 201/299 (67%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 |||||| || | ||||| | || |||||||| |||| ||||| | || | || Sbjct 17339 CCAAGCATCCACCTCAGAACTCTACGGAAAAGTCGTCGAAACACCTCAATCCGAGACGAC 17398 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || || || ||||| || ||||| || || ||||||||||| |||||||| Sbjct 17399 ACCATTCTACCCTCGTAGTCCTTATGGATGCGCCAAGTTGTACGCATATTGGATAGTGGT 17458 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 68583 |||||||| ||| | ||| |||| || || || | || || | ||||||||||| | Sbjct 17459 GAATTACCGCGAGGCCTATGGGATGTTTGCCTGTAA-TGGAATTCTGTTCAATCACGAAA 17517 Query 68584 GTCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTT 68643 |||||| |||| | ||||| || || || || || | || | ||| ||| || Sbjct 17518 GTCCCAGACGAGGACGGACCTTCGTAACGCGGAAGATTACCAGGGCAGCTGCGGATA-TT 17576 Query 68644 TCAATGGTGTCG-AAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 68701 || ||| | | || ||| ||||| | || ||| | || || | ||||| ||||| Sbjct 17577 TCGTTGGGCAAGCAGAATTGCCTGTATTTAGGGAATCTCGACGCGCAGAGAGACTGGGG 17635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102499405072900