Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1431 93.3 4e-14 seq9766 87.8 2e-12 >seq1431 Length=25833 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 52688 CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAA 52746 ||||||| ||||||| |||||||| || |||||||| | || ||||| | | ||| Sbjct 3731 CATGTGCCAGTACATTGAGTTTGTCGCCGATCGTCTCCTCGTTGCTCTCGGTAACGACAA 3672 Query 52747 AGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGA 52806 || || |||| || || || || || || ||| ||| || |||||| ||||||||| Sbjct 3671 GGT-CTACAACTCTACGAACCCCTTCGACTTCATGGACATGATCTCGCTTCAGGGCAAGA 3613 Query 52807 CCAACTTTTTCGAGAAGCGAGTC 52829 | ||||| ||||||||||| ||| Sbjct 3612 CGAACTTCTTCGAGAAGCGCGTC 3590 >seq9766 Length=663 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | ||||||||||| |||||||| || Sbjct 380 CCTCCACGAAGACGAAGGACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAA 439 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| ||||| || || |||| |||| ||||| || || || ||||| Sbjct 440 AGAGTGCGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGG 499 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| || || | | || | |||||| | |||||| ||| Sbjct 500 ATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTTATCGATGGTGTCCGACGACTCAACC 559 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || || || || || || || || ||||||||| Sbjct 560 TCAAGGGTGATGGTCTTGCCCGTGAGCGTCTTCACGAAGATCTGCATG 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496095320856480