Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1431 134 2e-26 seq4905 96.9 4e-15 >seq1431 Length=25833 Score = 134 bits (148), Expect = 2e-26 Identities = 348/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||||||| ||| || ||||| |||||| || ||| Sbjct 3920 GCAAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTAAGCCCT 3979 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||||| |||||| || || || || |||||||||||||| Sbjct 3980 GGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAGAAGATG 4039 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---A 127696 || ||||| ||||| || | || || || ||||||| ||| | ||| Sbjct 4040 CCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAGG---TAGACCGTTGATCGGAG 4096 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| | | ||||| | ||||| || ||| || || | ||| | |||||| || Sbjct 4097 ATCCAATGAAGGGCCCAGTCAGCCTTGCGCTTGATGCAAGGAATGGTTTCGATCGCGTCG 4156 Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 ||||| | | ||| | | |||||| ||||| |||| ||||| ||||| ||| Sbjct 4157 AAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGTATCGATGAGAAGGGAATAGGTT 4216 Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTT-CGCTTA 127874 |||| ||||| | | ||| || || | ||||||| | || |||| ||| Sbjct 4217 TCGCTGTGGATGTTCTCCATCAT-AATTTGGAAGCCGTAGAAGCAACGAGCTTCCGCAGC 4275 Query 127875 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 127934 | || || || | || |||| | | | || || ||||| || || || ||| Sbjct 4276 T-TGGACTTCGTTGGAAAAACGTTCAACCAAGTTTTCGTTGACAATACCGTCTGAGGCAG 4334 Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTT---CC 127991 | || || || || | || ||||| | ||||||| ||||||| | || || Sbjct 4335 CGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTCGTTCAACTTGTTAGACC 4394 Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||| || ||||| || || || | |||||| |||||||| Sbjct 4395 AGTCGTGAAGGTCCTTCGAAAGGTCCATCTCCTCAGCAGTCCA 4437 Score = 104 bits (114), Expect = 3e-17 Identities = 171/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| | ||||| || ||| ||| ||||| || || ||| ||||| Sbjct 6199 AGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGACC 6140 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 |||||||| || |||||||| | |||||| || || ||||| ||||||||||| || Sbjct 6139 AGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAATAT 6080 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGA-GCGGGACTTTGTATCAA 127697 || || || |||||| || | || || || ||||||| | | | | | || | Sbjct 6079 ACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCT-TCTA 6021 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 ||| || ||||| | |||||||| | |||||| || | ||||| |||||| || | Sbjct 6020 TCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCGA 5961 Query 127758 AGAG 127761 | || Sbjct 5960 AAAG 5957 >seq4905 Length=6543 Score = 96.9 bits (106), Expect = 4e-15 Identities = 270/410 (66%), Gaps = 7/410 (2%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 ||||| ||||| || || || | ||||| ||| |||| || | |||||| | Sbjct 6333 CGATCGAAGCGGCCAGGTCGCATAAGGGCAGGGTCGAGGACGTCCGGTCTGTTCGTACCA 6274 Query 12762 GCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGATTG 12821 || | ||| || || | || | |||| || |||||||| || | |||||| Sbjct 6273 GCAAGGACCACAATATGCTCCTGAGTGCCGAAACCGTCCATCTCCACCAGTAATTGATTT 6214 Query 12822 ATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACCCGCACTGCGTTGC----TTACC 12877 | ||| ||| |||||||||||| | || | ||| | || || | ||||| Sbjct 6213 AGGGTGGATTCGCGTTCATCATTCCCCC-CAAAGTTCCCTCCCTTCGCTCGAGATTTACC 6155 Query 12878 GACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAA 12937 | ||| || ||||| |||| ||||| |||||| || ||| | ||| | || Sbjct 6154 AATGGCATCGATTTCATCAACGAAAATGATACAGGGCGCATTCTTCTTGGCTGAAGCGAA 6095 Query 12938 GATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGA 12997 || |||||||| | | ||| || || |||||||||||||| || | | | || Sbjct 6094 GAGGTCTCGCACACGGGAAGAACCAACGCCGACAAACATCTCCACGAATTCTGATCCAGA 6035 Query 12998 -ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCC 13056 ||| | |||||||||||||| |||||| ||| |||| |||||| || ||||| | Sbjct 6034 TACAGACAA-GAAGGGGACGTTGGCTTCACCGGCGGTGGCCTTGGCGAGAAGAGTCTTTC 5976 Query 13057 CCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACCA 13106 | || ||||| || | ||| | || || || ||||| |||||||| Sbjct 5975 CGGTACCTGGAGGACCGGAGAGGATAGCGCCGCGAGGGATTTTGGCACCA 5926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613300647463440