Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9766 134 2e-26 seq9767 122 1e-22 seq3042 118 1e-21 seq20961 84.2 2e-11 >seq9766 Length=663 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || || |||||||| |||| |||||||||||||||||||| Sbjct 415 CTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGTCCGTCTTCGAGCTGCTTGCCGGCGAA 474 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || ||||| |||| || | | ||||||||| ||||||| ||||| | Sbjct 475 GATGAGACGTTGCTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTT 534 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||| || || || | |||||||| |||||||| ||||| || || Sbjct 535 ATCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTGAGCGTCTTCAC 594 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 595 GAAGATCTGCAT 606 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || || | | || |||||||||||||| ||||| Sbjct 187 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCGAA 246 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | || ||||||||| |||||| ||| | | Sbjct 247 GATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTCACATT 306 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || |||| ||||||||| ||||| |||| || || || Sbjct 307 GTCGATCGTGTCCGAAGACTCGACTTCCAACGTGATGGTCTTGCCAGTCAATGTCTTGAC 366 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 367 GAAGATCTGCAT 378 >seq9767 Length=446 Score = 122 bits (134), Expect = 1e-22 Identities = 145/194 (75%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| |||||||| || ||||| || |||| || | |||||| || ||||| Sbjct 445 CTCTTTCTGGATGTTGTAGTCAGAGAGAGTACGGCCGTCTTCCAACTGCTTTCCAGCGAA 386 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||||| || | || |||||||||| ||||||| ||||| ||| Sbjct 385 GATAAGACGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 327 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | |||||||| |||||||||| || || | Sbjct 326 TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 267 Query 46581 CAAAGATTTGCATT 46594 | |||||||||||| Sbjct 266 CGAAGATTTGCATT 253 >seq3042 Length=1648 Score = 118 bits (130), Expect = 1e-21 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||||||||| |||||||| |||| || | |||||| |||||||| Sbjct 2 CTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCTTCCAACTGCTTTCCGGCGAA 61 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||| || ||||||| || | | |||||||||| ||||| ||| | ||| Sbjct 62 GATGAGGCGTTGTTGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTT-AACGT 120 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || ||| || || || || | |||||||| |||||||||| || || | Sbjct 121 TGTCGATGGTATCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAAGGTCTTCA 180 Query 46581 CAAAGATTTGCATT 46594 | |||||||||||| Sbjct 181 CGAAGATTTGCATT 194 >seq20961 Length=332 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||| || || || || | | || |||||||||||||| || || Sbjct 187 CTCCTTCTGAATGTTGTAATCAGAAAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAA 246 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTC 46510 ||||||||||||||||||| || | || ||||||||| |||||| Sbjct 247 GATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTC 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565048098361680