Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq25433 131 2e-25 seq1431 113 6e-20 seq4905 91.5 2e-13 >seq25433 Length=527 Score = 131 bits (144), Expect = 2e-25 Identities = 297/438 (68%), Gaps = 18/438 (4%) Strand=Plus/Plus Query 15821 ACGCGCGTGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGAT 15880 |||| |||||| || ||||| ||| || || |||||| ||| ||| | || || Sbjct 57 ACGCATGTGAACTTTCAGGATCTGCTCACGGCCGCGAACATCTGGCAGACCAACAACGAC 116 Query 15881 CTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGT 15940 || ||| || || || || || || || | ||| ||||| | || || || || Sbjct 117 CTGACGGTCGAAACGGCCCGGACGCAGCAACGCTGGGTCAAGTACGTCTGGACGGTTAGT 176 Query 15941 TGCGGCGATGACAACAATACCT--GTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGC 15998 ||| || || || | || ||| ||| | || |||| || ||||| || || | | Sbjct 177 TGCAGCAATCACGATGATGCCTTCGTTGCCTT--CAAAGCCGTCCATTTCAACCAGCATC 234 Query 15999 TGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCT 16056 ||||| | |||||||| |||||||| | | | | | | |||||||| ||||| Sbjct 235 TGGTTCAGCGTTTGTTCACGTTCATCGTGACCACCGCCCAA--ACCAGCACCACGTTGGC 292 Query 16057 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG--GTTG--ATTTTCGCGAGCG 16112 || ||||| ||||||||||| ||||||| |||||||| | || ||||||| || Sbjct 293 GACCTACGGCGTCAATCTCATCGATGAAGATGATGCATGGCGCTGCTTTTTTCGCTTGC- 351 Query 16113 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 16172 || || | || || ||||| || |||||||| || ||||| || || |||| | Sbjct 352 ---TCGAACATGTCGCGCACACGAGATGCACCCACACCGACGAACATTTCAACGAAGTCT 408 Query 16173 GCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | ||||| || | || ||| || || |||| ||| ||||| |||||| || || | Sbjct 409 GAACCGGAA-ATAGTGAAGAAAGGAACTTTAGCTTCGCCCGCGATGGCTTTTGCCAGCAA 467 Query 16232 AGTCTTACCCGTACCTGG 16249 || ||||| ||||| || Sbjct 468 GGTTTTACCGGTACCCGG 485 >seq1431 Length=25833 Score = 113 bits (124), Expect = 6e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||||||||| || ||| |||| || || || || || |||||||||||||| |||| Sbjct 4079 CCTTTGCTGAACGCCTCGTCGCCTTCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCT 4020 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || || || | ||||| |||||||| || ||||||||||| || ||||||||| | Sbjct 4019 TCGCAGCCATCTTCTGGCTGAAGAAGCGTGGACTCATGCCAGGGCTTACCTTCTCCAATG 3960 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||| ||||||||||| | ||| || ||||| Sbjct 3959 AGCTGATCAGCCGTGACGAGGGCATGCACACGGACTTTGC 3920 Score = 105 bits (116), Expect = 8e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||||| || || ||| ||||||| ||| ||||| ||||| ||||||||||| || Sbjct 6038 TCCTTTGGAGAACGGCTCGTCGCATTCGCGGTCGTTGAAGGTATATTCTTCTCTGGATCA 6097 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 ||| || || | |||||||||||||| || |||||||| ||||| ||| || ||| Sbjct 6098 TTCGCGGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCTGGTCTTACCTTTTCAAAC 6157 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || |||||| || || ||||| | ||| || ||||| Sbjct 6158 GAACTTATCAGCCGAGATGAGGGCATGCACACCGATTTTGC 6198 >seq4905 Length=6543 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGAC 16114 || || | |||||| || ||||||| ||| | ||| || || ||| ||| | || Sbjct 6159 TTACCAATGGCATCGATTTCATCAACGAAAATGATACAGGGCGCATTCTTCTTGGCTGAA 6100 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 | ||||| || || ||||| | || || || |||||||||||||| || | || Sbjct 6099 G-CGAAGAGGTCTCGCACACGGGAAGAACCAACGCCGACAAACATCTCCACGAATTCTGA 6041 Query 16175 GGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 16233 | || ||| | ||||||||| || | |||||| || |||| ||||||||||| Sbjct 6040 TCCAGATACAGACAA-GAAGGGGACGTTGGCTTCACCGGCGGTGGCCTTGGCGAGAAGAG 5982 Query 16234 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTC 16293 |||| || |||||||| ||| | ||||| || || || || || ||||| ||| || Sbjct 5981 TCTTTCCGGTACCTGGAGGACCGGAGAGGATAGCGCCGCGAGGGATTTTGGCACCAAGTC 5922 Query 16294 CAAAGTATCTCTCAGGTTGCTTAAGAAA 16321 ||| || |||||| ||| || || Sbjct 5921 TTTCGTACTTCGCAGGTTCCTTCAGGAA 5894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620533411552480