Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq24792 170 5e-38 seq25232 131 4e-26 seq26286 111 4e-20 >seq24792 Length=536 Score = 170 bits (188), Expect = 5e-38 Identities = 283/404 (70%), Gaps = 6/404 (1%) Strand=Plus/Plus Query 30687 CCGGACATCAACCAGGAGGTGTACGGCCTGCCCGAATATCTCAGCTCGCTTCACTCGGCC 30746 |||||||| || |||||| |||| |||||||| || || |||||| | | || || Sbjct 80 CCGGACATTAATCAGGAGCTGTATGGCCTGCCAGAGTACCTCAGCGCATTAAACAGCGCG 139 Query 30747 TGGCTGAACGAGTCGTCGACGCTGTTCCGGCGGAAGTATTACGAAAACGGTAGCCACGCC 30806 ||||| || || || ||||||||| ||| || ||||||| ||| ||||| ||||| Sbjct 140 TGGCTCAATGAATCAGCGACGCTGTACCGCCGCAAGTATTTCGAGAACGGCGCGCACGCG 199 Query 30807 GGCTTCATCCTCTACATGACCGACGCGGCGCAGAAGCAGGAGGATGT--CGACAACATGC 30864 |||| | | || | |||||| | |||||||| | |||||| | || || ||| Sbjct 200 GGCTATGTGATGTATGTAACCGACCCTGCGCAGAACAAAGAGGATATTTCGGCAT--TGC 257 Query 30865 GCACGGCGTTGAAGAACGCGAAGGG-GCCGGGCAATTTCCGCAACGTGTTCATGTACGCG 30923 || | ||| || ||||||| | |||| ||||| | ||| | || | ||| Sbjct 258 GCGACATGATGAGCAAATCGAAGGGCGACGGG-AATTTTAGAAACATTTTTTATCATGCG 316 Query 30924 CCGGGCGGGAAAAAGGACGGTATCCAGCTCATCCCAGTGTCCGAGGTCGCGGCGAAGGAC 30983 ||| ||| ||| |||| || | | ||||| | ||| || || | ||||| Sbjct 317 CCGAACGGCAAACCCGACGCGATTAAAATTATCCCGCTTAGCGAAGTGGCAACCAAGGAT 376 Query 30984 GAGTTCTTCAACATCAAGAACGTGACGCGCGACGACCTGCTCGCCGCGCATCGCGTGCCG 31043 || ||||| ||||||||||||| ||| ||||| ||||||||| | ||||||||||||| Sbjct 377 GATTTCTTTAACATCAAGAACGCGACCCGCGATGACCTGCTCAGTGTGCATCGCGTGCCG 436 Query 31044 CCGCAACTGCTCGGTATCGTGCCGAGCAATTCGGGCGGGTTCGG 31087 ||||| || | || || | ||||||||| | ||||| || || Sbjct 437 CCGCAGATGATGGGGATTATCCCGAGCAATACCGGCGGATTTGG 480 >seq25232 Length=1112 Score = 131 bits (144), Expect = 4e-26 Identities = 195/272 (72%), Gaps = 15/272 (6%) Strand=Plus/Minus Query 26414 CACC-AGCTCGATGTTTTCCGCGA-CGCAGCCGCAACCGAAGTCTTCGACGACATACGCG 26471 |||| |||||||||||||| | ||| || ||| ||| |||| ||||| || | | Sbjct 272 CACCGAGCTCGATGTTTTCAATCATCGCCGC-GCAGCCGTAGTCCTCGACCACGAAATCC 214 Query 26472 TCGTTCGACGATTCGTAGTTCTCGATTTGGTCGCGCTTCGGGTTGTCGA--TCAGCGA-- 26527 | ||| ||| |||||||| ||||| |||| || | || ||| ||| ||| Sbjct 213 ACTTTCAGCGACTCGTAGTTTTCGATGCGGTCACG------GCTGGCGACCTCATCGATA 160 Query 26528 --GCGACGGCGCGCACCTTCCTGGAAGTAGATCGACAGGTTCTCCAGCTTCGTCACCATC 26585 ||| ||| ||| ||| || |||||| |||||||| ||||| || | | | Sbjct 159 TGGCGGCGGTGCGAGTTGTCCATGATGTAGATAGACAGGTTATCCAGACGGGTGATTAAC 100 Query 26586 ATCGCGCGCTTCGGGAAGAACGGCACACGCACGGCCGGCAGGTTGCCGATGCGCTTCTGG 26645 | |||| | |||||| ||||||| |||||||| |||||||||||||||||||||||| Sbjct 99 AACGCGTTGTCAGGGAAGTACGGCACGCGCACGGCGGGCAGGTTGCCGATGCGCTTCTGG 40 Query 26646 CTGACGATCAGGTCGGCCGCGAGCTGCTCGGT 26677 |||||||| | ||| | || |||| |||||| Sbjct 39 CTGACGATAACGTCACCGGCCAGCTTCTCGGT 8 >seq26286 Length=482 Score = 111 bits (122), Expect = 4e-20 Identities = 138/184 (75%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 27850 TTCGGTGCCGAGGCTCGCCGGGTCGTCGGTCGCGGCCAGGCCGACCAGATACGCTTCGCC 27909 |||||| ||||||||||| ||||| || || ||||||| ||||||||||| |||| ||| Sbjct 74 TTCGGTACCGAGGCTCGCAGGGTCATCAGTGACGGCCAGCCCGACCAGATAGGCTTTGCC 133 Query 27910 GATGTCGGCGAAGTCGGGATTGACTTCGATCGACGTGAAAACCTTCTGGCGCTTCTTCGA 27969 | ||| ||||| | || | ||| || || ||| ||| |||||| | | ||| || Sbjct 134 GGTGTTAGCGAAATTCGGGCGAATTTCCATGGAGGTGTAAATCTTCTGAC-CGGCTTTGA 192 Query 27970 -CAGCGCGACCAGCTCGTCGGTCGGATCGA-GCTGCGCGTACAGCCCCATCTTGCCTTTC 28027 || ||| |||||||||| ||||| || ||| ||||||| | || |||||| ||| Sbjct 193 CCATGGCGGCCAGCTCGTCAGTCGGGGTGATTCTG-GCGTACAACGCCCACTTGCCATTC 251 Query 28028 AGCG 28031 |||| Sbjct 252 AGCG 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129612931174636