Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1431 141 1e-28 >seq1431 Length=25833 Score = 141 bits (156), Expect = 1e-28 Identities = 367/558 (66%), Gaps = 11/558 (2%) Strand=Plus/Minus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || |||||||| || | ||||| |||| || || | ||| || ||||| || | | Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||| || || | || || | |||||| || | || ||||||||||| |||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 |||||||| || | || || || || || | ||||||| | | || || | Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200 ||||| | ||||| || ||||| | ||| | ||| || || ||||| || | | Sbjct 6021 ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCG 5962 Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260 || || | |||| | || || | |||| ||| || | | | || | Sbjct 5961 AAAAGGTGTTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATAGGTC 5902 Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320 || || || || || || || || || || |||||||||||||| | || | | Sbjct 5901 TCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCAACT 5842 Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380 || || ||| || |||||| |||||||| ||||||||||||||||| || |||||| Sbjct 5841 TGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCTGCG 5782 Query 19381 AAAAATGCTAATACATG---TTTAATAAAATGTTTTTCATCTGAGGTTAA----TGTATT 19433 || || || | ||||| | | | || ||| || || ||| | | | | Sbjct 5781 AAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCCTC----GTTCAGCCGTAGAGT 5726 Query 19434 CCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493 |||||| | || || || | ||| | |||||| || |||||||| || |||| ||| Sbjct 5725 CCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGC 5666 Query 19494 TTTTTTATACATGTTCCA 19511 | ||| ||||| ||||| Sbjct 5665 CTGTTTGTACATTTTCCA 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561919552019760