Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1431 116 4e-21 >seq1431 Length=25833 Score = 116 bits (128), Expect = 4e-21 Identities = 291/439 (66%), Gaps = 6/439 (1%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || |||||||| || | || ||||||| || || | ||| || |||||||| | Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | || | || || | ||| || || || || || |||||||| ||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA 37355 ||||||||||| | || ||||| || || ||| || || | |||| ||| Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCT 6022 Query 37356 ATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTT 37415 ||||| | | ||| ||||||||| ||| | ||| || || || || || | Sbjct 6021 ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCG 5962 Query 37416 AAGAGAAAGttttttt-CTTCACTA--TCTGTTATATAAGTATCAATTAGTAAACTATAC 37472 || || || || | || | || | || || ||||| || || | | ||| Sbjct 5961 AAAAG---GTGTTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATAG 5905 Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532 | || ||||| || || || || ||| || || || |||||||| ||| | |||| Sbjct 5904 GTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCA 5845 Query 37533 AATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 | ||| || || ||| |||| | | | | ||||||||||||||| || || |||| Sbjct 5844 ACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCT 5785 Query 37593 GCAAAGAAAGCAAGAACAT 37611 || ||||||||||| |||| Sbjct 5784 GCGAAGAAAGCAAGGACAT 5766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592117381741360