Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq12949 105 5e-18 >seq12949 Length=2570 Score = 105 bits (116), Expect = 5e-18 Identities = 209/307 (68%), Gaps = 2/307 (1%) Strand=Plus/Minus Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100 |||| || |||||||| || ||| ||||| | || |||| || | | |||| | Sbjct 548 CTTTTGGATTCCAGGCAGTCATGATTATGCGTCGATCAGCTGGATTATGCTTGATCTTCT 489 Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTG 30159 | | || | || |||||| ||||| ||| | ||||||||| ||| |||| || Sbjct 488 CGATACAGTCCTTCAACTGATCGACCCCTTGCCCGGTGTAGTCTGCA-TCACAGTCCTTG 430 Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219 || |||||||||||||| |||||||||||||| || || || |||| ||| || || Sbjct 429 TATTCTGCTCCGAAATGTCTCCACTGGAACCCATAGACGGGCCCCAAGTCCCCTTCGCGA 370 Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 | ||| | || || | ||| || ||| | | || ||||| | ||||| ||||| Sbjct 369 CGGTGGCCTAATCCTCGTCCGTCTAAGAAGGCCTTCGAGCCGTTCCCATCCCATATCTTG 310 Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339 || ||||||| || || | || | || |||| || ||||| || |||||| Sbjct 309 ACGCCCTTCTTTGAAAGGATGGTAGAATCGGTACACCCGTGGATAAACCAGAGGAGCTCC 250 Query 30340 TCCACGA 30346 || |||| Sbjct 249 TCGACGA 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408483467952782