Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1431 201 2e-46 >seq1431 Length=25833 Score = 201 bits (222), Expect = 2e-46 Identities = 382/560 (68%), Gaps = 7/560 (1%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||||||||||||| |||||| ||| ||||| |||||||| ||| | ||||||||| || Sbjct 3916 GCAGGCAAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTAAG 3975 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||||| || | || || |||||||| || || ||||| || ||||||||||| Sbjct 3976 CCCTGGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAGAA 4035 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG--CGTTCTTGTCT 48307 |||||| |||||||| ||||| ||| ||| | || | || | || ||| | || Sbjct 4036 GATGCCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAGGTAGACCGT--TGATCG 4093 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 |||||||| ||| |||||||| ||||| ||||||||| || || || || || || Sbjct 4094 GAGATCCAATGAAGGGCCCAGTCAGCCTTGCGCTTGATGCAAGGAATGGTTTCGATCGCG 4153 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 |||||| | | || || | || || || |||||| || || | || Sbjct 4154 TCGAAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGTATCGATGAGAAGGGAATAG 4213 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 | || ||| | ||||| || || ||||| ||||||||| | || || Sbjct 4214 GTTTCGCTGTGGATGTTCTCCATCATAATTTGGAAGCCGTAGAAGCAACGAGCTTCCGCA 4273 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | || ||||| |||| || | || | || || || ||||| || || ||||| ||| Sbjct 4274 GCTTGGACTTCGTTGGAAAAACGTTCAACCAAGTTTTCGTTGACAATACCGTCTGAGGCA 4333 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT---C 48604 || |||||||| || ||||| | ||| ||||| || |||| | | | || | Sbjct 4334 GCGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTCGTTCAACTTGTTAGAC 4393 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | ||| || ||||||| || || |||||||||| || || || Sbjct 4394 CAGTCGTGAAGGTCCTTCGAAAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCGGCC 4453 Query 48665 TTTTTGTACATGCCCCATAT 48684 || |||||||| |||||| Sbjct 4454 TTCTTGTACATTTGCCATAT 4473 Score = 197 bits (218), Expect = 3e-45 Identities = 379/557 (68%), Gaps = 5/557 (1%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| ||||| || |||||| ||| || || |||||||| || |||| || | Sbjct 6209 AGAGCAGGCAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAA 6150 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || ||||||||||||| ||| | || ||||||||||| || |||||||| || |||| Sbjct 6149 AGGTAAGACCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAG 6090 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||| || || || || ||||||| ||| ||||| ||||| || || | | | Sbjct 6089 AGAAGAATATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCC 6030 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 ||| |||||| | |||||||||||||| | ||||| || || || ||||| | Sbjct 6029 GATCTTCTATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGA 5970 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 | || ||| || | | | || | ||| | || ||| || ||| | | Sbjct 5969 TCGCGTCGAAAAGGTGTTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAG 5910 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 || |||| ||||| | ||||| || || ||||| ||||| || || ||| Sbjct 5909 AATAGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCT 5850 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 || || || || || | || |||| || | ||| || ||||| ||||| || || | Sbjct 5849 CAGCAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCG 5790 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG----A 48598 |||| || ||||| ||||||||||| | ||| ||| |||| | | | || | Sbjct 5789 AAGCTGCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCCTCGTTCAGCCGTA 5730 Query 48599 GCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCG 48658 | | |||| || ||| ||| || || | ||||||||| ||||| || ||||| Sbjct 5729 G-AGTCCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCC 5671 Query 48659 AGTGCTTTTTTGTACAT 48675 |||| | ||||||||| Sbjct 5670 TGTGCCTGTTTGTACAT 5654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931219176194560