Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1431 149 1e-30 >seq1431 Length=25833 Score = 149 bits (164), Expect = 1e-30 Identities = 381/572 (67%), Gaps = 21/572 (4%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||||||||| || || |||||| || || ||||| || || Sbjct 4473 ATATGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTT 4414 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTA-TCCAAAGAC---GAGCAGCATTT----TC 25588 | |||||| | ||| ||||| | | | | || ||| || | || || || Sbjct 4413 TCGAAGGACCTTCACGACTGGT-CTAACAAGTTGAACGACAATGAACGCCACTTCATCTC 4355 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 ||| || | | || ||||| || ||||| || ||||| || ||||| || || | Sbjct 4354 TCATGTTC----TCGCCTTCTTCGCTGCCTCAGACGGTATTGTCAACGAAAACTTGGTTG 4299 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 | | || ||| ||||| || | ||| || || |||||||| ||||| || Sbjct 4298 AACGTTTTTCCAACGAAGTCCAAGCTGCGGAAGCTCGTTGCTTCTACGGCTTCCAAATTA 4239 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||| || ||| || ||||| || || ||||||| || Sbjct 4238 TGATGGAGAACATCCACAGCGAAACCTATTCC---CTTCTCATCGATACCTACATTAAAG 4182 Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 | | ||||| | || || || | || ||||| ||| || |||||||| | | Sbjct 4181 ATGCTGCCGAACGCGACTACCTCTTCGACGCGATCGAAACCATTCCTTGCATCAAGCGCA 4122 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 |||| |||||| | | |||||| | || | |||| |||| || || || | Sbjct 4121 AGGCTGACTGGGCCCTTCATTGGATCTCCGATCAACGGTCTACCTTTGCTGAACGCCTCG 4062 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| || || ||||| |||||||| ||| || || || || ||||||||||||| Sbjct 4061 TCGCCTTCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCTTCGCAGCCATCTTCTGGC 4002 Query 25946 TCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 | ||| || | |||| |||||| ||||| ||| ||||| ||||| |||||| | ||| Sbjct 4001 TGAAGAAGC-GTGGACTCATGCCAGGGCTTACCTTCTCCAATGAGCTGATCAGCCGTGAC 3943 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 ||||| | |||| || ||||||||||| || Sbjct 3942 GAGGGCATGCACACGGACTTTGCCTGCCTTCT 3911 Score = 131 bits (144), Expect = 3e-25 Identities = 374/568 (66%), Gaps = 9/568 (2%) Strand=Plus/Plus Query 25480 TGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGGCC 25539 ||| | |||||||| |||| || ||| ||||||| ||||| |||||| || || Sbjct 5648 TGGAAAATGTACAAACAGGCACAGGCGTCATTTTGGACCGTGGAAGAAATTGATATGTCC 5707 Query 25540 AAGGACATGGACGGCTGGTACGCT----CTATCCAAAGACGAGCAGCATTTTCTCAAGT- 25594 |||||| |||| || | | || || || | | ||||| | || | ||| | Sbjct 5708 AAGGAC-TGGATGGATTGGACTCTACGGCTGAACGAGGACGAAC-GCTTCTTCATATCCC 5765 Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654 | || | || ||||| ||||| || || || ||||| || || || ||| ||| ||| Sbjct 5766 ATGTCCTTGCTTTCTTCGCAGCTTCGGACGGAATAGTTAATGAAAACCTGGTCGAACGAT 5825 Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 | | | || || || | |||| | ||||| ||||| ||||| || || | Sbjct 5826 TTTCTAATGAGGTCCAAGTTGCTGAGGTTAGATGTTTTTACGGCTTCCAAATAATGATGG 5885 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGCC 25773 | || | ||||| ||| ||| | | |||| | ||| || ||||| | || | | Sbjct 5886 AGAACATACACTCGGAGACCTATTCTATGCTTATCGAT-ACATACATCAAGGAACCCCTC 5944 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 || || | | || || | || |||||| |||||| | ||||| ||||| Sbjct 5945 CAGCGACAACACCTTTTCGACGCGATCGAGACCATACCTTGTATCAAAGAAAAGGCAGAC 6004 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||||| ||||| | | | | | ||||| || ||||| || || || Sbjct 6005 TGGGCCATCCGCTGGATAGAAGATCGGCATTCATCCTTTGGAGAACGGCTCGTCGCATTC 6064 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || | || || || || || ||| || || || ||||||||||||||||||||| || Sbjct 6065 GCGGTCGTTGAAGGTATATTCTTCTCTGGATCATTCGCGGCCATCTTCTGGCTCAAGAAG 6124 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 ||| |||||| || || |||||| ||||| || |||||| | || ||||| | Sbjct 6125 CGCGGGCTCATGCCTGGTCTTACCTTTTCAAACGAACTTATCAGCCGAGATGAGGGCATG 6184 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||| |||||||| |||||||||| || Sbjct 6185 CACACCGATTTTGCTTGCCTGCTCTTCA 6212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928532081176960