Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq23259 95.1 8e-14 seq20961 91.5 1e-12 seq9766 91.5 1e-12 >seq23259 Length=922 Score = 95.1 bits (104), Expect = 8e-14 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 474689 AAAATGAAACAAACCGCG--AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||| |||| || || | ||||| || || ||| ||||| || || || | Sbjct 59 AAAATGAAGAAAACGGCTGAAGAT--TATCTGGGCGAACCAGTTACTGAAGCGGTTATCA 116 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| || || || || || ||| |||| ||||| ||||||||||| || || | || | Sbjct 117 CTGTACCTGCTTACTTCAACGATGCTCAGCGTCAGGCAACTAAAGACGCCGGCCGTATCG 176 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 ||||||| | || |||||| || || || ||||| || || || || || || |||| Sbjct 177 CAGGTCTGGAAGTAAAACGTATCATCAACGAGCCAACGGCTGCTGCTCTGGCATACGGTC 236 Query 474867 TTGAT 474871 | ||| Sbjct 237 TGGAT 241 >seq20961 Length=332 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| ||||| || || || || || ||||||| || || Sbjct 157 ACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGT 216 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| ||| || || ||||| |||||||| || | || || || || |||||||| || Sbjct 217 CCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGAATGCC 276 Query 480671 TTCCTTGTCTTGAATCTT 480688 ||||||||| |||||||| Sbjct 277 TTCCTTGTCCTGAATCTT 294 >seq9766 Length=663 Score = 91.5 bits (100), Expect = 1e-12 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||||||||| || || |||||||| || ||| ||| || || ||||| | ||| Sbjct 385 ACGAAGACGAAGGACGAGATGAAGGGTGGACTCCTTTTGGATG--TTGTAATCCGAAAGA 442 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | ||||| || ||||| || || || || |||||||| ||||| ||||| || Sbjct 443 GTGCGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGGATA 502 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTC 480727 || ||||||||||| ||||| ||||| || || || || | | | || || Sbjct 503 CCCTCCTTGTCTTGGATCTTCGCCTTGACGTTATCGATGGTGTCCGACGACTCAA-CCTC 561 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| || || || || ||||| ||||| ||||| || || Sbjct 562 AAGGGTGATGGTCTTGCCCGTGAGCGTCTTCACGAAGATCTG 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267023870056232