Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq4877 127 3e-24 seq4878 118 1e-21 >seq4877 Length=18368 Score = 127 bits (140), Expect = 3e-24 Identities = 298/449 (66%), Gaps = 8/449 (2%) Strand=Plus/Minus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||| |||||||| | | || || ||||| |||| ||| | || | ||||| || Sbjct 17640 CATGACCCCAGTCTCTCTGCGCGTCGAGATTCCCTAAATACAGGCAATTCTGCTTGCCCA 17581 Query 47921 CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTG 47980 || || | ||| || |||||||| || ||||| || || || ||||| | Sbjct 17580 ACGAAATATCCGCAGCTGCCCTGGTAATCTTCCGCGTTACGAAGGTCCGTCCTCGTCTGG 17521 Query 47981 GAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGT 48040 || ||| ||||| || ||||| ||| |||||||| |||| || || | || || || | Sbjct 17520 GACTTTCGTGATTGAACAGAATTCCATTACAGGCAAACATCCCATAGGCCTCGCGGTAAT 17461 Query 48041 TCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAG 48100 || |||||||| || | || | || || ||||||||| ||| || ||||| | Sbjct 17460 TCACCACTATCCAATATGCGTACAACTTGGCGCATCCATAAGGACTACGAGGGTAGAATG 17401 Query 48101 GTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTT 48160 |||| ||||| | || || || || || || || || ||||| ||||||||||| Sbjct 17400 GTGTCGTCTCGGATTGAGGTGTTTCGACGACTTTTCCGTAGAGTTCTGAGGTGGATGCTT 17341 Query 48161 GATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACT----GCCTCAAGCACTCTC 48216 | |||| ||||| | || | | || | | || || || |||| | | Sbjct 17340 GGTAGAAGCGAACATGGTTTTGGA----GACCACATGTCCTAATCGCATCGAGCAAGCGC 17285 Query 48217 AGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACA 48276 | ||| |||| |||| | |||||| ||||||| |||||| || || || || ||| Sbjct 17284 AAGGTTCCTAGCCCATCGACATCACCAGTGTACTCGGCCATCTCGAAAGAGACTTTGACA 17225 Query 48277 TGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||| || || || || || || ||||| Sbjct 17224 TGAGATTGGGCGCCGAGGTTGTAGATCTC 17196 >seq4878 Length=14580 Score = 118 bits (130), Expect = 1e-21 Identities = 293/445 (66%), Gaps = 0/445 (0%) Strand=Plus/Minus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||| |||||||| | | || || ||||| || | ||| | |||| || || || Sbjct 13839 CATGACCCCAGTCTCTTTGCGCGTCGAGATTCCCCAAATAAAGGCAGTTCTGTTTGCCCA 13780 Query 47921 CAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTG 47980 ||||| | ||| || | ||||| || ||||| || || || | || | Sbjct 13779 ATGAGATGTCCGCAGCTGCCCTGGAGATCTTCCGCGTTACGAAGGTCCTTCCTCTCCTGG 13720 Query 47981 GAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGT 48040 || |||||| || || ||||| ||| ||||||| |||| ||||| | || || || | Sbjct 13719 GACTTTCATGGTTGAACAGAATCCCATTACAGGCGAACATCCCGTAGGCCTCGCGGTAAT 13660 Query 48041 TCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAG 48100 || |||||||||||| | || | || || || |||||| ||| |||||||| | Sbjct 13659 TCACCACTATCCAGTACGCGTACAACTTGGCGCATCCGTAAGGACTACGCGGATAGAAGG 13600 Query 48101 GTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTT 48160 |||| ||||| | || || ||||| ||||| ||||| || || ||| || |||| Sbjct 13599 GTGTCGTCTCGGATTGAGGTGTCTCGACGACCTTGCCATAGAGCTCTGAGGTCGACGCTT 13540 Query 48161 GATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGG 48220 | |||| ||||| | || | || | || || || |||| | || | Sbjct 13539 GGTAGAAGCGAACATGGTTTTGAAGACCACATGTCCTGATCGCATCGAGCAACCGCAAAG 13480 Query 48221 TGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGAC 48280 | |||| |||| | |||||| ||||| | ||||||||| || || || ||||| Sbjct 13479 TTCCTAGCCCATCGACATCACCAGTGTACTCAGCCATCTCAAATGAGACTTTGACATGGG 13420 Query 48281 TCTGTGCCCCAAGATTATAAATCTC 48305 || || || ||||| || ||||| Sbjct 13419 ATTGGGCGCCGAGATTGTAGATCTC 13395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665270344672880