Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4905 93.3 5e-14 seq1431 87.8 2e-12 >seq4905 Length=6543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 160/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 ||||||||| ||||| || ||||| | ||| | ||| |||||||| |||||||| || Sbjct 5926 TGGTGCCAAAATCCCTCGCGGCGCTATCCTCTCCGGTCCTCCAGGTACCGGAAAGACTCT 5985 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAA 175393 |||||| |||| ||| |||||| | || ||||| ||| | | || |||| || Sbjct 5986 TCTCGCCAAGGCCACCGCCGGTGAAGCCAACGTCCCCTTCTTGTCTGTA-TCTGGATCAG 6044 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | || |||||||||||||| || || ||| | | || || || ||||| | || Sbjct 6045 AATTCGTGGAGATGTTTGTCGGCGTTGGTTCTTCCCGTGTGCGAGACCTCTTCG-CTTCA 6103 Query 175454 CCCGCGAA-AATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 || ||| ||| || ||||| | ||| ||||||| || ||||| Sbjct 6104 GCCAAGAAGAATGCGCCCTGTATCATTTTCGTTGATGAAATCGATGC 6150 >seq1431 Length=25833 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || || ||||| | || || || ||||| || ||||||||||| || || | Sbjct 4079 CCTTTGCTGAACGCCTCGTCGCCTTCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCT 4020 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || || || | ||| |||||||||| || ||||||||||| || |||||| |||| Sbjct 4019 TCGCAGCCATCTTCTGGCTGAAGAAGCGTGGACTCATGCCAGGGCTTACCTTCTCCAATG 3960 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 | || || ||| || ||||| | ||| ||| |||||| Sbjct 3959 AGCTGATCAGCCGTGACGAGGGCATGCACACGGACTTTGCC 3919 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||| | || || || | || || ||| || || ||||| |||||||| || ||| Sbjct 6038 TCCTTTGGAGAACGGCTCGTCGCATTCGCGGTCGTTGAAGGTATATTCTTCTCTGGATCA 6097 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| || || | ||| | |||||||| || |||||||| || || ||| ||||| Sbjct 6098 TTCGCGGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCTGGTCTTACCTTTTCAAAC 6157 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 |||||||| |||||||||||| | ||| || ||||| Sbjct 6158 GAACTTATCAGCCGAGATGAGGGCATGCACACCGATTTTGC 6198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596368749929920