Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1431 114 2e-20 >seq1431 Length=25833 Score = 114 bits (126), Expect = 2e-20 Identities = 365/562 (65%), Gaps = 25/562 (4%) Strand=Plus/Minus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || |||||||| ||||| | || ||||||| | || | |||||| ||| || | Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 || ||||| | || | || || ||||| || || | ||||| | ||| |||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 18278 ATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGC--TCA 18335 ||||| |||||| |||||| || | | | ||| |||| | || || | || Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAA---GGATGAATGCCGATCT 6025 Query 18336 G-TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCA 18394 |||||| ||||| ||| | | ||||| ||||| |||| || || Sbjct 6024 TCTATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCG 5965 Query 18395 TTAAACAAATCATCTTTTTCTTTGGAA----TCTTTTATATAAGTGTCGATTAACAAAGA 18450 | || | | || || |||| || || || || || ||||| | || ||| Sbjct 5964 TCGAAAAGGTG----TTGTCGCTGGAGGGGTTCCTTGATGTATGTATCGATAAGCATAGA 5909 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 ||| | || || |||||| | ||||| ||| || || | ||||| ||||| |||| Sbjct 5908 ATAGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCTC 5849 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 | | ||| | ||| || |||||| ||| |||| || ||||||||||| ||||| | Sbjct 5848 AGCAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCGA 5789 Query 18571 AGATGCGAAAAATGCCAAAACAT---ATTTAATGAAATGTTTTTCATTATCCTTGAG--- 18624 || |||||| || || | |||| || | | ||| | ||| | || || || Sbjct 5788 AGCTGCGAAGAAAGCAAGGACATGGGATATGAAGAAGCG---TTCGTCCTCGTTCAGCCG 5732 Query 18625 -ATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATG 18683 | || | || |||| | || || || | ||||| ||||||| |||||||| || | Sbjct 5731 TAGAGTCCAATCCATCCA-GTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACG 5673 Query 18684 ATTCGGCCTGTTTGTACATTTT 18705 | ||||||||||||||||| Sbjct 5672 CCTGTGCCTGTTTGTACATTTT 5651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731625596994400