Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq24646 271 4e-68 seq17979 228 4e-55 seq25772 140 2e-28 >seq24646 Length=557 Score = 271 bits (300), Expect = 4e-68 Identities = 351/482 (73%), Gaps = 2/482 (0%) Strand=Plus/Minus Query 59723 TCCTGTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGA 59782 |||||||||| || |||||||| ||||| ||||||||||| | || | |||||||| | Sbjct 556 TCCTGTTCTATTCAGGCTTCTATCTGCCAATGTACTGGTCCCGCCGCGCCAAGCTGACCA 497 Query 59783 ACACGGCCGACATGATCCGGCTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCG 59842 | || || ||| ||||||| || |||||||| || || ||||| ||||| || || || | Sbjct 496 ATACCGCTGACCTGATCCGTCTGATCATTCGCGATGAAGCGGTACACGGTTATTATATTG 437 Query 59843 GATACAAGTTCCAGCGCGGCCTGGAGACTCAGAACGAGGCTCGCC-GCGAGGAGCTGAAG 59901 | ||||| |||||| | | ||| | | | ||| | ||||| ||| || | ||| Sbjct 436 GTTACAAATTCCAGAAAGCCTTGGCGCTGGAAAGCGAAGATCGCCAGCGGCAAG-TCAAG 378 Query 59902 GACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGATTGAGTACACGCAGGAT 59961 | | ||| | |||| | | || |||||||| |||||||| ||||| | || Sbjct 377 GCACAGGCGTTTGATCTGATTCAGGATTTGTACGATAACGAGATCCGCTACACCGAAGAG 318 Query 59962 CTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCTGCGCTACAACGCCAAC 60021 ||||| |||| |||||| || || ||||| |||| |||||||| ||||||||| ||| Sbjct 317 CTGTATGACGACGTGGGCTGGAGCGAAGATGTGAAGAAGTTCCTGCACTACAACGCTAAC 258 Query 60022 AAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGACGAAACCGAGGTGAAT 60081 |||||||||||||| || || || |||||||||||||| | | | || ||||| Sbjct 257 AAGGCGCTGATGAACCTGGGTTATGAGGCGCTGTTCCCTGCCAGCATGGCAGACGTGAAC 198 Query 60082 GCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAACCACGACTTCTTCTCGGGC 60141 | || |||||| ||||| |||| || || || || |||||||| |||||||| || Sbjct 197 CCCGCCATCTTGTCGGCATTGTCGCCAAACGCCGATGAAAACCACGATTTCTTCTCCGGT 138 Query 60142 TCTGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAAGACGAGGATTGGGACTTC 60201 |||||| | || |||||||| | ||| | | || || || ||||| ||||| ||| Sbjct 137 TCTGGCTCGTCATACGTGATTGGTACGGCGGTGAACACCGAGGATGAGGACTGGGATTTC 78 Query 60202 TA 60203 || Sbjct 77 TA 76 >seq17979 Length=529 Score = 228 bits (252), Expect = 4e-55 Identities = 285/388 (73%), Gaps = 6/388 (2%) Strand=Plus/Minus Query 59472 GAGCCTGATCCCTGACGCGATCACGCCGCACGAGGAGGCGGTGTACACGAACATCGCGTT 59531 || |||||| |||||| ||||||| ||||| |||||||||||| | || ||| || Sbjct 496 GACCCTGATGAAAGACGCGGTCACGCCACACGAAGAGGCGGTGTACTCCAATATCTGCTT 437 Query 59532 CATGGAGTCGGTGCACGCGAAGAGCTACAGCAACATCTTCTCGACGCTGTGCTCGTCCAA 59591 |||||| |||| ||||| |||||| || ||||| ||||||||| | || Sbjct 436 TATGGAGGCGGTACACGCCCGCTCGTACAGCTCGATTTTCTCCACGCTGTGCGCCACCTC 377 Query 59592 GGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAGAA--TC-CGAACCTGCAACGCAAGGC 59648 ||| | |||| || | |||||| || ||||| || || |||||| ||| || Sbjct 376 GGACGTAGACGAAGCTTATCGCTGGAGCGAAGAGAACGTCGCG---CTGCAAAACAAAGC 320 Query 59649 TCAGATCGTCCTGGACTACTACCAGGGTGACGATCCGCTGAAGCGGAAGGTGGCCTCGAC 59708 |||| | || |||||| | || | |||||||||| | ||| || ||| Sbjct 319 GGCGATCATTCTCTCCTACTATGACGGGCAAGATCCGCTGATGAAGAAAGTCGCCAGCGT 260 Query 59709 GTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTCTACCTGCCGATGTACTGGTCTAGTCG 59768 ||| || ||| |||||||||||||| |||||||| ||||||||||||||||| || || Sbjct 259 GTTCCTCGAGTCTTTCCTGTTCTACTCCGGCTTCTATCTGCCGATGTACTGGTCGAGCCG 200 Query 59769 GGGGAAGCTGACGAACACGGCCGACATGATCCGGCTCATCATTCGTGACGAGGCGGTGCA 59828 | |||||||| ||||| |||||| ||||||| || |||||||| || ||||| || || Sbjct 199 CGCCAAGCTGACCAACACCGCCGACCTGATCCGCCTGATCATTCGCGATGAGGCTGTTCA 140 Query 59829 CGGCTACTACATCGGATACAAGTTCCAG 59856 |||||| |||||||| || ||||||||| Sbjct 139 CGGCTATTACATCGGTTATAAGTTCCAG 112 >seq25772 Length=476 Score = 140 bits (154), Expect = 2e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 60004 CTGCGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGC 60063 |||| |||||||||||| || |||||||||||||| || || || || ||||||||| | Sbjct 1 CTGCACTACAACGCCAATAAAGCGCTGATGAATCTGGGTTATGAAGCCCTGTTCCCGGCC 60 Query 60064 GACGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAAC 60123 | | || || || |||| |||||| | || ||||| || || || || ||| Sbjct 61 AGCATGGCGGACGTCAACCCGGCTATCTTGTCAGCCCTGTCGCCGAACGCCGATGAAAAC 120 Query 60124 CACGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAA 60183 |||||||||||||| ||||| ||| | || |||||||||| ||| | | ||| ||| Sbjct 121 CACGACTTCTTCTCCGGCTCCGGCTCGTCCTACGTGATTGGCACGGCGGTGAATACCGAA 180 Query 60184 GACGAGGATTGGGACTTCTA 60203 ||||| || ||||||||||| Sbjct 181 GACGAAGACTGGGACTTCTA 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258846203729784