Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq918 116 1e-20 >seq918 Length=9278 Score = 116 bits (128), Expect = 1e-20 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 251417 ACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGA 251476 || ||| ||| ||||||| || |||||||||| || || | || || |||| || Sbjct 6524 ACATATCACAGACATGGAGGCGGTAAGCATCACTAGCCTCGAAGAGACGCTCCTTCAAGA 6465 Query 251477 AGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCAC 251536 ||| || ||| || |||||||||||||| || ||||| || |||||||| | |||| Sbjct 6464 AGCCAGCGATACCATGCGAAATCATACAATCGCGTTCCATCTCTCCGAAACGCAATCCAC 6405 Query 251537 CATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGC 251596 |||| ||| | ||||||| | |||||||||||||| | | ||||| | | Sbjct 6404 CATCTCGACTTCGACCCTCGACGGGCTGACGAGTGAGGATCTGGACGGGACCACGAGCAC 6345 Query 251597 GGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653 | ||| |||||||| ||||| ||||| || || |||||| ||| || |||| Sbjct 6344 GAGAATGGATCTTATCATCCACCATGTGCTTCAGTCGTTGGTAGTATGTTGGGCCGA 6288 Score = 98.7 bits (108), Expect = 3e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 || ||| | ||||||||||| ||||| || |||||||||||||||| ||||| Sbjct 6105 AGATGGCCAATAGTCATACGGGAAGGAATGGCGTGGGGATTGATGATGAGATCGGGAACG 6046 Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTT 251954 | || || || ||||| ||||||| ||| | || ||| || | ||||| || ||||| Sbjct 6045 ATACCCTCTGCGGTGAACGGCATAT-CTTCTTGTCTGTAAGTGATACCAATCGTACCCTT 5987 Query 251955 TTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||| |||||| |||||| ||||| || Sbjct 5986 CTGTCCGTGTCGAGAAGCGAACTTGTCACCGAT 5954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471309687704758