Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1431 122 1e-21 >seq1431 Length=25833 Score = 122 bits (134), Expect = 1e-21 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 || |||| ||| || |||||| |||||| ||||| |||||||||| ||||||||| Sbjct 3573 GCTTTGGAGTAGTCAGAGACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGAAGCGAGATC 3632 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||| | | |||||| ||| ||| ||||| | || Sbjct 3633 ATGTCCATGAAGTCGAAGGGGTTCGTAGAGTTGTAGACCTTGTCGTTACCGAGAGCAACG 3692 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || || || |||||||||||||| |||||||||||||||||| | |||||||| ||| Sbjct 3693 AGGAGACGATCGGCGACAAACTCAATGTACTGGCACATGAGGTTACCATTCATGCCAATG 3752 Query 868871 AG 868872 || Sbjct 3753 AG 3754 Score = 109 bits (120), Expect = 7e-18 Identities = 201/288 (70%), Gaps = 9/288 (3%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || || || ||||| | |||||| ||||| || || |||||||| ||||||||| Sbjct 6180 CCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGACCAGGCATGAGCCCGCGCTTC 6121 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||| ||| || ||||| || || || || ||| | || || Sbjct 6120 TTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAATATACCTTCAACGACCGCGAAT 6061 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| |||||| || |||||| | | ||| ||| | ||||| || |||||| Sbjct 6060 GCGACGAGCCGTTCTCCAAAGG-ATGAATGCCGATCTTCT--ATCCAGCGGATGGCCCAG 6004 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCG-CGAAAGAGGTG--GTCCTTT 869416 || ||||||| | | | || | || ||||| ||| ||||| ||||| ||| | Sbjct 6003 TCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCGAAA-AGGTGTTGTCGCTG 5945 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || || ||||||| || || ||||| || | |||||||||||| Sbjct 5944 GAGG--GGTTCCTTGATGTATGTATCGATAAGCATAGAATAGGTCTCC 5899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104928869828078