Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1431 131 3e-24 >seq1431 Length=25833 Score = 131 bits (144), Expect = 3e-24 Identities = 228/327 (70%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || || || || ||||| | |||||| |||| || || |||||||| ||||||||| Sbjct 6180 CCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGACCAGGCATGAGCCCGCGCTTC 6121 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||| || ||||| || || || || ||| | || || Sbjct 6120 TTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAATATACCTTCAACGACCGCGAAT 6061 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||||||||| || | |||| | | ||| || | ||||| || ||||| Sbjct 6060 GCGACGAGCCGTTC-TCCAAAGGATGAATGCCGATCTTCT--ATCCAGCGGATGGCCCAG 6004 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAAAGAGGTGGTCCTTCTC 794579 |||||||||| | | | || | || ||||| ||| ||||| ||||| | || Sbjct 6003 TCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCGAAA-AGGTGTTGTCGCTG 5945 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 || || ||||||| ||| || ||||| || | || |||||||| ||||| ||||| || Sbjct 5944 GAGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATAGGTCTCCGAGTGTATGTTCTC 5885 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCA 794666 || || |||||||| ||||| || Sbjct 5884 CATCATTATTTGGAAGCCGTAAAAACA 5858 Score = 102 bits (112), Expect = 1e-15 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 |||||| |||||| ||||| |||||||||| |||||||||| ||||| | ||| Sbjct 3591 ACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGAAGCGAGATCATGTCCATGAAGTCGAAG 3650 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACG 794036 ||||| | | |||| ||| ||| ||||| | | || || || |||||||| Sbjct 3651 GGGTTCGTAGAGTTGTAGACCTTGTCGTTACCGAGAGCAACGAGGAGACGATCGGCGACA 3710 Query 794037 AATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAG 794080 || ||||||||||||||||||||| | |||||||| ||||| Sbjct 3711 AACTCAATGTACTGGCACATGAGGTTACCATTCATGCCAATGAG 3754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913381307574026