Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9766 122 8e-23 seq1431 102 8e-17 seq20961 82.4 7e-11 >seq9766 Length=663 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| || || || |||||||| | ||| ||| |||||||| Sbjct 403 ATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGTCCGTCTTCGAGCTG 462 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | ||||| || ||||| ||||||||||| || |||||||| |||||| Sbjct 463 CTTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGGATACCCTCCTTGTCTTGGATCTT 522 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||| | | ||| || || | ||||| ||| ||||| || Sbjct 523 CGCCTTGACGTTATCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGT 582 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||| ||||||||| Sbjct 583 GAGCGTCTTCACGAAGATCTGCATG 607 Score = 109 bits (120), Expect = 5e-19 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 |||||||| ||||| || ||||| || | || || | | ||||||||||||||| Sbjct 182 GTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTG--CCA-TCCTCGAGCTGCTTG 238 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || | ||||||||||||||||| |||||||||||||| ||||| | Sbjct 239 CCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCC 298 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | |||||| | | ||| || || | |||| ||| ||||| |||| Sbjct 299 TTCACATTGTCGATCGTGTCCGAAGACTCGACTTCCAACGTGATGGTCTTGCCAGTCAAT 358 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 359 GTCTTGACGAAGATCTGCAT 378 >seq1431 Length=25833 Score = 102 bits (112), Expect = 8e-17 Identities = 342/523 (65%), Gaps = 16/523 (3%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||||||||||| ||||||||| || |||||||| ||| || || Sbjct 3914 AGGCAGGCAAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTA 3973 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 || || ||||||| || | |||| | |||| ||||| || ||| || || ||| Sbjct 3974 AGCCCTGGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAG 4033 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG-CCGTCTTGCT 120818 || | ||| ||||| ||| |||||||| | ||| || || || || | ||| ||| | Sbjct 4034 AAGATGCCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAGGTAGACCG--TTGAT 4091 Query 120819 -GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGC---ACGCACGGCATCCGCTCGA 120874 | |||||| | | |||||| || ||| |||||| | ||| || || |||| Sbjct 4092 CGGAGATCCAATGAAGGGCCCAGTCAGCC---TTGCGCTTGATGCAAGGAATGGTTTCGA 4148 Query 120875 ACGCGTTCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAAT-CAGCTGATGGATGAGCAGA 120933 ||||| | || |||||| ||| | | || ||| || | || |||||| || Sbjct 4149 TCGCGTCGAAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGT-ATCGATGAGAAGG 4207 Query 120934 TTGTACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCC 120993 || |||| |||| | | ||| |||| | ||| | ||| ||| | | || Sbjct 4208 GAATAGGTTTCGCTGTGGATGTTCTCCATCATAATTTGGAAGCCGTAGAAGCAACGAGCT 4267 Query 120994 TC--CAGCTCGGGCACCGCCCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGT 121051 || ||||| || | || | | || || | | ||| || || |||| || Sbjct 4268 TCCGCAGCTTGGACTTCGTTGGAAAAACGT--TCAACCAAGTTTTCGTTGACAATACCGT 4325 Query 121052 CGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCT 121111 | | ||| |||||||| || || || || ||| ||||| || || | ||| | | || Sbjct 4326 CTGAGGCAGCGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTCGTTCAACT 4385 Query 121112 TGTGCGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | | |||| | |||||| || ||||| | |||||| Sbjct 4386 TGTTAGACCAGTCGTGAAGGTCCTTCGAAAGGTCCATCTCCTC 4428 >seq20961 Length=332 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/140 (74%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAGCTGCTTG 133520 |||||||| ||||| || |||||||| | || || | | ||||||||||||||| Sbjct 182 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTCCTG--CCA-TCCTCGAGCTGCTTG 238 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || | ||||||||||||||||| |||||||||||||| ||||| | Sbjct 239 CCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGAATCTTCGCC 298 Query 133581 TTGAGCTGCTCAACCGTGTC 133600 || | | |||| |||||| Sbjct 299 TTCACATTGTCAATCGTGTC 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483258044302160