Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq9766 120 3e-22 seq20961 100 3e-16 seq13091 86.0 6e-12 >seq9766 Length=663 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| |||||||||||||| | Sbjct 152 CCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAA 211 Query 134547 ACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| || | || |||||||| ||||| || || ||||| |||||||| ||||| || Sbjct 212 AGGGTCCTGCCA-TCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGAGG 270 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || || ||||| || || || ||| | ||||| || || || || Sbjct 271 AATGCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATCGTGTCCGAAGACTCGAC 330 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || || || || ||||| || ||||| Sbjct 331 TTCCAACGTGATGGTCTTGCCAGTCAATGTCTTGACGAAGATCTGCAT 378 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||||| || || ||||| |||||||| |||||||| || | Sbjct 380 CCTCCACGAAGACGAAGGACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAA 439 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || || || | ||| ||||||||||| || Sbjct 440 AGAGTGCGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGG 499 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| || | ||||| ||||| || || Sbjct 500 ATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTTATCGATGGTGTCCGACGACTCAACC 559 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 560 TCAAGGGTGATGGTCTTGCCCGTGAGCGTCTTCACGAAGATCTGCAT 606 >seq20961 Length=332 Score = 100 bits (110), Expect = 3e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| ||||||||||| || | Sbjct 152 CCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAA 211 Query 134547 ACGGT-GTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | ||| || | || |||||||| ||||| ||||| ||||| |||||||| ||||| || Sbjct 212 AGGGTCCTGCCA-TCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCGGGAGG 270 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 |||||||| || || ||||| || Sbjct 271 AATGCCTTCCTTGTCCTGAATCTT 294 >seq13091 Length=2397 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || |||||||| || ||||||||||||| Sbjct 44 CCACCACGGAGGCGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGCTC 103 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| |||||||| || || || || ||||| ||||||||||| || || Sbjct 104 AAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGA 163 Query 134607 AT 134608 || Sbjct 164 AT 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505228244993680