Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1431 178 2e-39 >seq1431 Length=25833 Score = 178 bits (196), Expect = 2e-39 Identities = 365/536 (68%), Gaps = 10/536 (2%) Strand=Plus/Minus Query 39637 GCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTT 39696 ||||||||||| || || | |||||| ||||| || || |||||||| || || ||||| Sbjct 6181 GCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGACCAGGCATGAGCCCGCGCTT 6122 Query 39697 TTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA 39756 |||||||| || ||||| || || |||||||| ||||| || ||||| || | || || Sbjct 6121 CTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAATATACCTTCAACGACCGCGAA 6062 Query 39757 TGCAACAAGTCTCTCTCCGTAACTTGTAT---CATTATGTATCCA-CTTCTGTGCCCAAT 39812 ||| || || | ||||| | || || || | |||||| | || ||||| | Sbjct 6061 TGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCTTCTATCCAGCGGATG-GCCCAGT 6003 Query 39813 CAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCA 39871 | || || |||||| | |||||| || || || || || | || || | ||| | Sbjct 6002 CTGCCTT-TTCTTTGATACAAGGTATGGTCTCGATCGCGTCGAAAAGGTGTTGTCGCTGG 5944 Query 39872 TCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCA 39931 || || | |||||||| || | || | ||| | || || || ||||| || Sbjct 5943 AGGGGTTCCTTGATGTATGTATCGATAAGCATAGAATAGGTCTCCGAGTGTATGTTCTCC 5884 Query 39932 ATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAAT 39991 ||| || || || |||||||||||||| | |||| || ||| ||||| | ||||| Sbjct 5883 ATCATTATTTGGAAGCCGTAAAAACATCTAACCTCAGCAACTTGGACCTCATTAGAAAAT 5824 Query 39992 CTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATG- 40050 | ||| ||| |||||||| |||||||| || ||| || || || || | ||||| Sbjct 5823 CGTTCGACCAGGTTTTCATTAACTATTCCGTCCGAAGCTGCGAAGAAAGCAAGGACATGG 5764 Query 40051 --TTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGAT 40108 | | | || || || ||| | | | |||| || | || || || Sbjct 5763 GATATGAAGAAGCGTTCGTCCTCGTTCAGCCGTAGAGTCCAATCCATCCAGTCCTTGGAC 5704 Query 40109 ATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCA 40164 ||||| | |||||| | |||||||| ||||||| ||||| ||||||||| ||||| Sbjct 5703 ATATCAATTTCTTCCACGGTCCAAAATGACGCCTGTGCCTGTTTGTACATTTTCCA 5648 Score = 136 bits (150), Expect = 5e-27 Identities = 367/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||| ||||| || | |||||| || | || || | || || || || || || Sbjct 3916 GCAGGCAAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTAAG 3975 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| || |||||||| || ||||| || ||||| || || |||||||| ||||| Sbjct 3976 CCCTGGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAGAA 4035 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC----GTAACTTGTATCATTAT 39791 ||||||||| ||||| || || || || || | || | ||| || | || Sbjct 4036 GATGCCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAGGTAGACCGT-TGATCGG 4094 Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 ||||| | | ||||| ||||| || ||| | ||||| || ||||| || || | Sbjct 4095 AGATCCAATGAAGGGCCCAGTCAGCCTTGCGCTTGATGCAAGGAATGGTTTCGATCGCGT 4154 Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| || | ||| || |||||||| || ||||| || | || ||| Sbjct 4155 CGAAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGTATCGATGAGAAGGGAATAGG 4214 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 |||| |||||||| || ||| || || || ||||| || || | ||||| | | Sbjct 4215 TTTCGCTGTGGATGTTCTCCATCATAATTTGGAAGCCGTAGAAGCAACGAGCTTCCGCAG 4274 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 ||| || || |||| | ||| |||| ||||| || || || || || || | Sbjct 4275 CTTGGACTTCGTTGGAAAAACGTTCAACCAAGTTTTCGTTGACAATACCGTCTGAGGCAG 4334 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATT---CC 40088 | || || || | ||||| || || | ||||| | |||| || || || Sbjct 4335 CGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTCGTTCAACTTGTTAGACC 4394 Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 |||| | | || || || | || | || ||||| ||||| || || || || |||| Sbjct 4395 AGTCGTGAAGGTCCTTCGAAAGGTCCATCTCCTCAGCAGTCCAGAAAGAAGCTTCGGCCT 4454 Query 40149 TTTTGTACATGTTCCATAT 40167 | |||||||| | |||||| Sbjct 4455 TCTTGTACATTTGCCATAT 4473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686677534979760