Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1431 174 1e-38 >seq1431 Length=25833 Score = 174 bits (192), Expect = 1e-38 Identities = 376/558 (67%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 43733 TGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACT 43792 ||| ||||||||||| | |||||||||||||||||||| | |||||| ||||| || | Sbjct 5648 TGGAAAATGTACAAACAGGCACAGGCGTCATTTTGGACCGTGGAAGAAATTGATATGTCC 5707 Query 43793 AAAGACTTAGCACATTGGATTGCATTAA--AACCACAAGAAAAACATTTT-ATATCTTTG 43849 || |||| |||||| | | ||| | | || | | || ||||| Sbjct 5708 AAGGACTGGATGGATTGGACTCTACGGCTGAACGAGGACGAACGCTTCTTCATATCCCAT 5767 Query 43850 GTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT 43909 || | || || || || || ||||| ||||| |||||||| |||| || ||| Sbjct 5768 GTCCTTGCTTTCTTCGCAGCTTCGGACGGAATAGTTAATGAAAACCTGGTCGAACGATTT 5827 Query 43910 GCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAA 43969 | | || || ||| | | || | |||||||||| || || ||||| || || Sbjct 5828 TCTAATGAGGTCCAAGTTGCTGAGGTTAGATGTTTTTACGGCTTCCAAATAATGATGGAG 5887 Query 43970 AATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAG 44029 || || || ||||| | || | | || || ||||| |||||||| || | | || Sbjct 5888 AACATACACTCGGAGACCTATTCTATGCTTATCGATACATACATCAAGGAACCCCTCCAG 5947 Query 44030 AAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGG 44089 || | | || | ||||| || || ||||| || ||| | || ||||||||| Sbjct 5948 CGACAACACCTTTTCGACGCGATCGAGACCATACCTTGTATCAAAGAAAAGGCAGACTGG 6007 Query 44090 GCCCTTAAATGGATAAAT--TCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCA 44146 ||| | |||||| | || || || ||||||||||| || ||||| || || Sbjct 6008 GCCATCCGCTGGATAGAAGATCGGCATTCATCCTTTGGAGAACGGCTCGTCGCATTCGCG 6067 Query 44147 GTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGA 44206 || || ||||| || ||||| || ||||| || |||||||| || ||| | ||||| || Sbjct 6068 GTCGTTGAAGGTATATTCTTCTCTGGATCATTCGCGGCCATCTTCTGGCTCAAGAAGCGC 6127 Query 44207 GGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACAT 44266 || | |||||||| | || |||||||| || | || || || ||||| ||| | || Sbjct 6128 GGGCTCATGCCTGGTCTTACCTTTTCAAACGAACTTATCAGCCGAGATGAGGGCATGCAC 6187 Query 44267 TGCGATTTTGCTTGCTTG 44284 ||||||||||||| || Sbjct 6188 ACCGATTTTGCTTGCCTG 6205 Score = 145 bits (160), Expect = 6e-30 Identities = 374/560 (67%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 ||||||||||||||||| || || | || || || ||||| || || || | || | Sbjct 4473 ATATGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACTGCTGAGGAGATGGACCTT 4414 Query 43790 ACTAAAGACTTAGCAC-ATTGGATTGC--ATTAAAACCACAA-GAAAAACATTTTATATC 43845 | || ||| | ||| | ||| | | | ||| |||| ||| || || || || Sbjct 4413 TCGAAGGACCTT-CACGACTGGTCTAACAAGTTGAACGACAATGAACGCCACTTCATCTC 4355 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCG 43905 | ||| | || || || ||||| ||||| || ||||| ||||| |||||| || Sbjct 4354 TCATGTTCTCGCCTTCTTCGCTGCCTCAGACGGTATTGTCAACGAAAACTTGGTTGAACG 4295 Query 43906 GTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCAT 43965 ||| | | ||||| ||| | ||||| || || || || || || |||||| || Sbjct 4294 TTTTTCCAACGAAGTCCAAGCTGCGGAAGCTCGTTGCTTCTACGGCTTCCAAATTATGAT 4235 Query 43966 AGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCA 44025 || || || || |||| || ||||| || ||||| ||||| ||||||| Sbjct 4234 GGAGAACATCCACAGCGAAACCTATTCCCTTCTCATCGATACCTACATTAAAGATGCTGC 4175 Query 44026 CGAGAAGCATCGAT-TGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAG 44084 ||| | || | | | || | ||||| ||||| | ||| || || | || || | Sbjct 4174 CGA-ACGCGACTACCTCTTCGACGCGATCGAAACCATTCCTTGCATCAAGCGCAAGGCTG 4116 Query 44085 ACTGGGCCCTTAAATGGATAAAT--TCAAATGATT-CTTTTGGAGAACGACTTGTCGCGT 44141 ||||||||||| | ||||| |||| | | | |||| ||||| || ||||| | Sbjct 4115 ACTGGGCCCTTCATTGGATCTCCGATCAACGGTCTACCTTTGCTGAACGCCTCGTCGCCT 4056 Query 44142 TTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGA 44201 | || | ||||||||||| ||||| || ||||| || || ||||| || ||| | |||| Sbjct 4055 TCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCTTCGCAGCCATCTTCTGGCTGAAGA 3996 Query 44202 AACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCT 44261 | || || | ||||| ||| | || || || |||||| | || || ||||| || ||| Sbjct 3995 AGCGTGGACTCATGCCAGGGCTTACCTTCTCCAATGAGCTGATCAGCCGTGACGAGGGCA 3936 Query 44262 TACATTGCGATTTTGCTTGC 44281 | || || ||||| ||| Sbjct 3935 TGCACACGGACTTTGCCTGC 3916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397325531838670