Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1431 154 2e-32 seq25433 98.7 1e-15 seq10699 93.3 5e-14 seq4905 93.3 5e-14 >seq1431 Length=25833 Score = 154 bits (170), Expect = 2e-32 Identities = 355/525 (68%), Gaps = 15/525 (3%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| ||| ||| | |||||||||||| ||| || ||||| |||||| || || Sbjct 3919 GGCAAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTAAGCCC 3978 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||| || |||||||||| |||||| || || || || |||||||||||||| Sbjct 3979 TGGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAGAAGAT 4038 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC--- 130191 || ||||| ||||| || | ||| || |||||||||| ||| | ||| Sbjct 4039 GCCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAGG---TAGACCGTTGATCGGA 4095 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 130251 | ||| | | ||||| | ||||| || ||| || || | ||| | |||||| || Sbjct 4096 GATCCAATGAAGGGCCCAGTCAGCCTTGCGCTTGATGCAAGGAATGGTTTCGATCGCGTC 4155 Query 130252 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 ||||| | | ||| | | |||||| ||||| |||| ||||| ||||| || Sbjct 4156 GAAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGTATCGATGAGAAGGGAATAGGT 4215 Query 130312 TTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTT-CGCTT 130369 ||||| |||| | | ||| || || | ||||||| | || |||| ||| Sbjct 4216 TTCGCTGTGGATGTTCTCCATCAT-AATTTGGAAGCCGTAGAAGCAACGAGCTTCCGCAG 4274 Query 130370 ATCTGTACCTCATCTGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCC 130428 | || || || | || |||| ||| | | || || ||||| || || || | Sbjct 4275 CT-TGGACTTCGT-TGGAAAAACGTTCAACCAAGTTTTCGTTGACAATACCGTCTGAGGC 4332 Query 130429 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTT--- 130485 ||| || || || || | || ||||| | ||||||| ||||||| | || Sbjct 4333 AGCGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTCGTTCAACTTGTTAGA 4392 Query 130486 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||||| ||| |||||||| || || | |||||| |||||||| Sbjct 4393 CCAGTCGTGAAGGTCCTTCGAAAGGTCCATCTCCTCAGCAGTCCA 4437 Score = 102 bits (112), Expect = 1e-16 Identities = 170/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| || ||| ||| ||||| || || ||| ||||| Sbjct 6198 GCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGACCA 6139 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||||||| || |||||||| | |||||| || || ||||| ||||||||||| || Sbjct 6138 GGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAATATA 6079 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA-GCGGGACTTTGTATCAAA 130194 || || || |||||| || | ||| || || ||||||| | | | | | || | Sbjct 6078 CCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATCT-TCTAT 6020 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 ||| || ||||| | ||||||| | |||||| || | ||||| |||||| || || Sbjct 6019 CCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCGTCGAA 5960 Query 130255 GAG 130257 || Sbjct 5959 AAG 5957 >seq25433 Length=527 Score = 98.7 bits (108), Expect = 1e-15 Identities = 277/416 (67%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 14018 ATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGACCT 14077 |||| ||| || ||||| ||| || || || || || ||| || || || || Sbjct 76 ATCTGCTCACGGCCGCGAACATCTGGCAGACCAACAACGACCTGACGGTCGAAACGGCCC 135 Query 14078 GGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATG 14137 || || || | || |||||| | || ||||| || || || || || | |||| Sbjct 136 GGACGCAGCAACGCTGGGTCAAGTACGTCTGGACGGTTAGTTGCAGCAATCACGATGATG 195 Query 14138 CC--CGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGC 14195 || ||| | || ||||||| ||||| ||| || | || || | |||||||| | Sbjct 196 CCTTCGTTGCCTT--CAAAGCCGTCCATTTCAACCAGCATCTGGTTCAGCGTTTGTTCAC 253 Query 14196 GTTCATCATTCGCAG-GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCA 14254 ||||||| | || || | ||| |||| ||||| ||| ||||||||||| ||| Sbjct 254 GTTCATCGTGACCACCGCCCAA-ACCAGCACCACGTTGGCGACCTACGGCGTCAATCTCA 312 Query 14255 TCGATGAAAACGATACATG--GTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTC 14312 |||||||| | ||| |||| | || |||| | || || || || || ||||| | Sbjct 313 TCGATGAAGATGATGCATGGCGCTGCTTTTTTC--GCTTGCTCGAACATGTCGCGCACAC 370 Query 14313 TCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAG 14371 ||||| ||||| || ||||| || || || | | ||||| || | || ||| Sbjct 371 GAGATGCACCCACACCGACGAACATTTCAACGAAGTCTGAACCGGAA-ATAGTGAAGAAA 429 Query 14372 GGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427 || || |||| ||| |||||||||||| || || | ||| || || || || || Sbjct 430 GGAACTTTAGCTTCGCCCGCGATGGCTTTTGCCAGCAAGGTTTTACCGGTACCCGG 485 >seq10699 Length=1968 Score = 93.3 bits (102), Expect = 5e-14 Identities = 210/314 (67%), Gaps = 10/314 (3%) Strand=Plus/Plus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 179867 ||| ||||| ||||| | || || |||||||| ||| |||| || ||||| Sbjct 13 ATCGGTCATGATCATCAACCTTCCGTAGCGAAGACTGGAGACATTGCTGTACTCCTTGTT 72 Query 179868 TTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAGT 179922 ||||| ||||||| ||||||||||| | | || |||| ||| |||| || || Sbjct 73 ATGTTGTAGACCCATGATCTTCTTGATGTTTTGGATTTCTTCGTTCTTCATGATCTG-GT 131 Query 179923 TGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAG 179982 ||| || ||||| || || | ||| || || || ||||| || ||| | Sbjct 132 CATGCCTT----GCTTCTCGTACGTTCAAAAGCTTTCCGCGAAGGGGGAAAACGCCGAAA 187 Query 179983 TGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 180042 | ||||||||||| |||| || ||||| || || | | ||| || || || || || Sbjct 188 TTGTCACGACCAACAACAGCAAGTCCAGCGACAGCCAACGACTTGGCAGAGTCTCCTTCA 247 Query 180043 GTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAAC 180102 || | |||||| |||||||| | | || || || || ||||| |||||| ||| Sbjct 248 GTTAAGATGAGTGTACACTTCTCGGCGTGCTTGGTTCCAGCATTGTTGGCGTCGGATAAC 307 Query 180103 TTGGGAATACCAGT 180116 || | || ||||| Sbjct 308 TTAGCCATGCCAGT 321 >seq4905 Length=6543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 215/320 (67%), Gaps = 7/320 (2%) Strand=Plus/Minus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGC 14212 || || |||||||| || | |||||| | ||| |||||||||||||||| | | Sbjct 6243 AAACCGTCCATCTCCACCAGTAATTGATTTAGGGTGGATTCGCGTTCATCATTCCCCC-C 6185 Query 14213 ATACCACCCGCACTGCGTTGC----TTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 | | ||| | || || | ||||| | ||| || |||||||| | ||||| ||| Sbjct 6184 AAAGTTCCCTCCCTTCGCTCGAGATTTACCAATGGCATCGATTTCATCAACGAAAATGAT 6125 Query 14269 ACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 ||| || ||| | ||| | |||| |||||||| | | ||| || || Sbjct 6124 ACAGGGCGCATTCTTCTTGGCTGAAGCGAAGAGGTCTCGCACACGGGAAGAACCAACGCC 6065 Query 14329 CACAAACATCTCCACAAAATTGGCGGCGGA-ACATTGGATGAAGGGGACGTTAGATTCAC 14387 |||||||||||||| || | | | || ||| | |||||||||||| | ||||| Sbjct 6064 GACAAACATCTCCACGAATTCTGATCCAGATACAGACAA-GAAGGGGACGTTGGCTTCAC 6006 Query 14388 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCAC 14447 | ||| |||| |||||| || ||||| || || ||||| || | ||| | || | Sbjct 6005 CGGCGGTGGCCTTGGCGAGAAGAGTCTTTCCGGTACCTGGAGGACCGGAGAGGATAGCGC 5946 Query 14448 CACGTGGGATCCTGGCACCA 14467 | || ||||| |||||||| Sbjct 5945 CGCGAGGGATTTTGGCACCA 5926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618226988329040