Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq25433 125 8e-24 seq1431 113 5e-20 seq4905 91.5 2e-13 >seq25433 Length=527 Score = 125 bits (138), Expect = 8e-24 Identities = 296/438 (68%), Gaps = 18/438 (4%) Strand=Plus/Plus Query 9460 ACGCGCGTGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGAT 9519 |||| |||||| || ||||| ||| || || |||||| ||| ||| | || || Sbjct 57 ACGCATGTGAACTTTCAGGATCTGCTCACGGCCGCGAACATCTGGCAGACCAACAACGAC 116 Query 9520 CTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGT 9579 || ||| || || || || ||||| || | ||| ||||| | || || || || Sbjct 117 CTGACGGTCGAAACGGCCCGGACGCAGCAACGCTGGGTCAAGTACGTCTGGACGGTTAGT 176 Query 9580 CGCGGCGATGACAACAATACCT--GTTTCATTATCAAAACCATCCATCTCTGTCAAAAGT 9637 || || || || | || ||| ||| | || |||| || ||||| || || | Sbjct 177 TGCAGCAATCACGATGATGCCTTCGTTGCCTT--CAAAGCCGTCCATTTCAACCAGCATC 234 Query 9638 TGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCT 9695 ||||| | |||||||| |||||||| | | | | | | |||||||| ||||| Sbjct 235 TGGTTCAGCGTTTGTTCACGTTCATCGTGACCACCGCCCAA--ACCAGCACCACGTTGGC 292 Query 9696 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG--GTTG--ATTTTCGCGAGCG 9751 || ||||| ||||||||||| ||||||| |||||||| | || ||||||| || Sbjct 293 GACCTACGGCGTCAATCTCATCGATGAAGATGATGCATGGCGCTGCTTTTTTCGCTTGC- 351 Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811 || || | || || ||||| || |||||||| || ||||| || || |||| | Sbjct 352 ---TCGAACATGTCGCGCACACGAGATGCACCCACACCGACGAACATTTCAACGAAGTCT 408 Query 9812 GCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9870 | ||||| || | || ||| || || |||| ||| ||||| |||||| || || | Sbjct 409 GAACCGGAA-ATAGTGAAGAAAGGAACTTTAGCTTCGCCCGCGATGGCTTTTGCCAGCAA 467 Query 9871 AGTCTTACCCGTACCTGG 9888 || ||||| ||||| || Sbjct 468 GGTTTTACCGGTACCCGG 485 >seq1431 Length=25833 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||||||||| || ||| |||| || || || || || |||||||||||||| |||| Sbjct 4079 CCTTTGCTGAACGCCTCGTCGCCTTCGCCGCAGTGGAAGGCATCTTCTTCTCTGGATCCT 4020 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || || || | ||||| |||||||| || ||||||||||| || ||||||||| | Sbjct 4019 TCGCAGCCATCTTCTGGCTGAAGAAGCGTGGACTCATGCCAGGGCTTACCTTCTCCAATG 3960 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||| ||||||||||| | ||| || ||||| Sbjct 3959 AGCTGATCAGCCGTGACGAGGGCATGCACACGGACTTTGC 3920 Score = 105 bits (116), Expect = 8e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||||| || || ||| ||||||| ||| ||||| ||||| ||||||||||| || Sbjct 6038 TCCTTTGGAGAACGGCTCGTCGCATTCGCGGTCGTTGAAGGTATATTCTTCTCTGGATCA 6097 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||| || || | |||||||||||||| || |||||||| ||||| ||| || ||| Sbjct 6098 TTCGCGGCCATCTTCTGGCTCAAGAAGCGCGGGCTCATGCCTGGTCTTACCTTTTCAAAC 6157 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || |||||| || || ||||| | ||| || ||||| Sbjct 6158 GAACTTATCAGCCGAGATGAGGGCATGCACACCGATTTTGC 6198 >seq4905 Length=6543 Score = 91.5 bits (100), Expect = 2e-13 Identities = 237/353 (67%), Gaps = 9/353 (3%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 ||||| |||||||| || | ||| || | || ||| |||||||||||| | | Sbjct 6243 AAACCGTCCATCTCCACCAGTAATTGATTTAGGGTGGATTCGCGTTCATCATTC-CCCCC 6185 Query 9674 ATACCACCAGCACTGCGTT---GCTTT-CCCACGGCATCAATCTCATCAATGAAGACGAT 9729 | | || | || || | | ||| || | |||||| || ||||||| ||| | ||| Sbjct 6184 AAAGTTCCCTCCCTTCGCTCGAGATTTACCAATGGCATCGATTTCATCAACGAAAATGAT 6125 Query 9730 GCATGGTTGATT-TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788 || || ||| ||| | || | ||||| || || ||||| | || || | Sbjct 6124 ACAGGGCGCATTCTTCTTG-GCTGAAGCGAAGAGGTCTCGCACACGGGAAGAACCAACGC 6066 Query 9789 CAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCA 9847 | |||||||||||||| || | || | || ||| | ||||||||| || | |||| Sbjct 6065 CGACAAACATCTCCACGAATTCTGATCCAGATACA-GACAAGAAGGGGACGTTGGCTTCA 6007 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 9907 || || |||| ||||||||||||||| || |||||||| ||| | ||||| || Sbjct 6006 CCGGCGGTGGCCTTGGCGAGAAGAGTCTTTCCGGTACCTGGAGGACCGGAGAGGATAGCG 5947 Query 9908 CCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAA 9960 || || || || ||||| ||| || ||| || |||||| ||| || || Sbjct 5946 CCGCGAGGGATTTTGGCACCAAGTCTTTCGTACTTCGCAGGTTCCTTCAGGAA 5894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583064430670160